Job Description Q47537 Confidence 98.04% Date Thu Jan 5 12:36:50 GMT 2012 Rank 59 Aligned Residues 126 % Identity 15% Template d1b1xa1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Transferrin Resolution 2.62

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	A	V	N	V	T	V	A	Y	Q	T	S	A	E	P	A	K	V	A	Q	A	D	N	T	F	A	K	E	S	G	A	T	V	D	W	R	K	F	D	S	G	A	S	I	V	R	A	L	A	S	G	D	V	Q	I	G	N	L	G	S	S	P	L	A	V	A	A	S	Q	Q	V	P	I	E	V	F	L	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	P	R	K	S	V	R	W	C	T	I	S	P	A	E	A	A	K	C	A	K	F	Q	R	N	M	K	K	V	R	G	P	S	V	S	C	I	R	K	T	S	S	F	E	C	I	Q	A	I	A	A	N	K	A	D	A	V	T	L	D	G	G	L	V	Y	E	A	G	L	H	P	Y	K	L	R	P	V	A	A	E
Template Known Secondary structure												S	S																	T	T										S	S										T	T	S			B													S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		100	.	.	.	.										.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.																										.	.
Query SS confidence							.	.	.	.	.	.	.	.	.																										.	.
Query Sequence		S	K	L	G	N	.	.	.	.	.	.	.	.	.	S	E	A	L	V	V	K	K	T	I	S	K	P	E	D	L	I	G	K	R	I	A	V	P	F	.	.	I	S	T	T	H	Y	S	L	L	A	A	L	K	H	W	G	I
Query Conservation							.	.	.	.	.	.	.	.	.																										.	.
Alig confidence							.	.	.	.	.	.	.	.	.											.															.	.
Template Conservation																										.
Template Sequence		V	Y	Q	T	R	G	K	P	Q	T	R	Y	Y	A	V	A	V	V	K	K	G	S	G	F	.	Q	L	N	Q	L	Q	G	V	K	S	C	H	T	G	L	G	R	S	A	G	W	N	I	P	I	G	T	L	R	P	Y	L	N
Template Known Secondary structure			B			S	S	S		B	S										T	T				.		G	G	G		T	T						S		T	T		T	T	T	T							S
Template Predicted Secondary structure																										.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions