Job Description Q47537 Confidence 98.00% Date Thu Jan 5 12:36:50 GMT 2012 Rank 61 Aligned Residues 199 % Identity 14% Template d1atga_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.20

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90				.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																																																					.	.	.
Query SS confidence																																																																					.	.	.
Query Sequence		N	V	T	V	A	Y	Q	T	S	A	E	P	A	K	V	A	Q	A	D	N	T	F	A	K	E	S	G	A	T	V	D	W	R	K	F	D	S	G	A	S	I	V	R	A	L	A	S	G	D	V	Q	I	G	N	L	G	S	S	P	L	A	V	A	A	S	Q	Q	.	.	.	V	P	I	E	V	F	L	L	A	S
Query Conservation																																																																					.	.	.
Alig confidence																						.																																															.	.	.
Template Conservation																						.
Template Sequence		E	L	K	V	V	T	A	T	N	F	L	G	T	L	E	Q	L	A	G	Q	.	F	A	K	Q	T	G	H	A	V	V	I	S	S	G	S	S	G	P	V	Y	A	Q	I	V	N	G	A	P	Y	N	V	F	F	S	A	D	E	K	S	P	E	K	L	D	N	Q	G	F	A	L	P	G	S	R	F	T	Y	A	I
Template Known Secondary structure									G	G	G											.																									T	T				S					S	S	S									T	T		B		T	T
Template Predicted Secondary structure																						.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120				.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.					.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																						.	.	.								.	.																					.	.	.	.
Query SS confidence																						.	.	.								.	.																					.	.	.	.
Query Sequence		K	L	G	N	S	E	A	L	V	V	K	K	T	I	S	K	P	E	D	L	.	.	.	I	G	K	R	I	A	V	.	.	P	F	I	S	T	T	H	Y	S	L	L	A	A	L	K	H	W	G	I	K	.	.	.	.	P	G	Q	V	E	I	V	N	L	Q	P	P	A	I	I	A	A	W	Q	R	G	D	I	D
Query Conservation																						.	.	.								.	.																					.	.	.	.
Alig confidence																						.	.	.								.	.																					.	.	.	.
Template Conservation
Template Sequence		G	K	L	V	L	W	S	A	K	P	G	L	V	D	N	Q	G	K	V	L	A	G	N	G	W	R	H	I	A	I	S	N	P	Q	I	A	P	Y	G	L	A	G	T	Q	V	L	T	H	L	G	L	L	D	K	L	T	A	Q	E	R	I	V	E	A	N	S	V	G	Q	A	H	S	Q	T	A	S	G	A	A	D
Template Known Secondary structure									S	S	T	T	T	S		T	T	S	G	G	G	G	S	S	S		S							T	T	T														T	T								T	T						S	S										T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	Y	V	W	A	P	A	V	N	A	L	E	K	D	G	K	V	L	T	D	S	E	Q	V	G	Q	W	G	A	P	T	L	D	V	W	V	V	R	K	D	F	A	E	K	H	P	E	V	V	K	A	F	A	K
Query Conservation
Alig confidence																																											.	.	.
Template Conservation																																											.	.	.
Template Sequence		L	G	F	V	A	L	A	Q	I	I	Q	A	A	A	K	I	P	G	S	H	W	F	P	P	A	N	Y	Y	E	P	I	V	Q	Q	A	V	I	T	K	S	T	.	.	.	A	E	K	A	N	A	E	Q	F	M	S
Template Known Secondary structure							G	G	G	T			T	T	S			S	S							G	G	G	S										B	T	T		.	.	.	S
Template Predicted Secondary structure																																											.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.				.	.	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions