Return to main results Retrieve Phyre Job Id

Job DescriptionQ47537
Confidence97.56%DateThu Jan 5 12:36:50 GMT 2012
Rank90Aligned Residues208
% Identity19%Templated1amfa_
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution1.75

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50.........60.........70.........80.........90.........100...
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Query Sequence  NVTVAYQTSAEPAKVAQADNTFAKESGATVDWRKFDSGASIVRALASGDVQIGNLGSSPLAVAASQQVPIEVFLLASKLG
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Template Sequence  KITVFAAASLTNAMQDIATQ. FKKEKGVDVVSSFASSSTLARQIEAGAPADLFISADQKWMDYAVDKKAIDTATRQTLLG
Template Known Secondary structure  GGG.


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   4.....10.........20... ......30.........40.........50.........60.........70.........80..
 
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Query Sequence  NSEALVVKKT. . . . . . . ISKPEDLI. . . . GKRIAV. . PFISTTHYSLLAALKHWGIKPG. . QVEIVNLQPPAIIAAWQRG
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Template Sequence  NSLVVVAPKASVQKDFTIDSKTNWTSLLNGGRLAVGDPEHVPAGIYAKEALQKLGAWDTLSPKLAPAEDVRGALALVERN
Template Known Secondary structure 
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   169170.........180.........190.........200.........210.........220......... 230........
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Query Sequence  DIDGAYVWAPAVNALEKDGKVLTDSEQVGQWGAPTLDVWVVRKDFAEKHPEVVKAFAKSAI. . DAQQPYIAN
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Template Sequence  EAPLGIVYGSD. . . AVASKGVKVVATFPEDSHKKVEYPVAVVEG. . . HNNATVKAFYDYLKGPQAAEIFKRY
Template Known Secondary structure  SSS...
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GGGS

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   163......170... ......180.........190.........200... ......210.........220........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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