 |
Job Description | Q47537 | Confidence | 76.62% | Date | Thu Jan 5 12:36:50 GMT 2012 |
Rank | 162 | Aligned Residues | 67 |
% Identity | 21% | Template | d1a99a_ |
SCOP info | Periplasmic binding protein-like II
| Periplasmic binding protein-like II
| Phosphate binding protein-like
|
Resolution | 2.20 |
|
 |
  |   |
22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | |
|
. | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
| . | . |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | V | N | V | T | V | A | Y | Q | T | S | A | E | P | A | K | V | A | Q | A | D | N | T | F | A | K | E | S | G | A | T | V | D | W | R | K | F | D | S | G | A | S | I | V | R | A | L | A | S | G | D | . |
. |
V | Q | I | G | N | L | G | S | S | P | L | A | V | A | A | S | Q | Q | V |
Query Conservation |   |
  |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|   |   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   | . | . |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   | . | . | . |
|
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
Q | K | T | L | H | I | Y | N | W | S | D | Y | I | A | P | D | T | V | A | N | . |
. |
. |
F | E | K | E | T | G | I | K | V | V | Y | D | V | F | D | S | N | E | V | L | E | G | K | L | M | A | G | S | T | G | F | D | L | V | V | P | S | A | S | F | L | E | R | Q | L | T | A | G | V |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  | T | T |
| S |
| T | T |  |  |  |  | . | . | . |  |  |  |  |  |
|
|  |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| S |  |  |
|
| B |  |  |  |  |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  | . | . | . |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
29 | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | |
|
|
. | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|