Job Description Q47537 Confidence 99.95% Date Thu Jan 5 12:36:50 GMT 2012 Rank 14 Aligned Residues 210 % Identity 19% Template c3tqwA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:methionine-binding protein; PDBTitle: structure of a abc transporter, periplasmic substrate-binding protein2 from coxiella burnetii Resolution 2.00 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.			90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																																																																			.	.
Query SS confidence																																																																			.	.
Query Sequence		V	T	V	A	Y	Q	T	S	A	E	P	A	K	V	A	Q	A	D	N	T	F	A	K	E	S	G	A	T	V	D	W	R	K	F	D	S	G	A	S	I	V	R	A	L	A	S	G	D	V	Q	I	G	N	L	G	S	S	P	L	A	V	A	A	S	Q	.	.	Q	V	P	I	E	V	F	L	L	A	S	K	L
Query Conservation																																																																			.	.
Alig confidence																																																																			.	.
Template Conservation
Template Sequence		V	R	V	G	T	I	A	G	P	E	T	Q	L	X	E	V	A	K	Q	V	A	L	N	R	Y	G	L	H	V	N	I	I	T	F	S	D	Y	N	T	P	N	E	A	L	A	D	G	S	V	D	A	N	X	F	Q	H	L	P	Y	L	K	A	Q	I	E	X	R	G	Y	K	I	V	S	I	G	K	T	F	V	Y
Template Known Secondary structure								T	T																											S		T	T	S							T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.																	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	N	S	E	A	L	V	V	K	K	T	I	S	K	P	E	D	L	I	G	K	R	I	A	V	P	F	I	S	T	T	H	Y	S	L	L	A	A	L	K	H	W	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	P	G	Q	V	E	I	V	N	L	Q	P	P	A	I	I	A	A	W	Q
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation																			.	.																																																									.	.
Template Sequence		P	X	G	L	Y	S	K	K	I	T	A	L	T	Q	L	K	T	.	.	G	A	K	I	A	V	P	S	D	P	S	N	E	A	R	A	L	L	L	L	E	K	A	Q	L	I	Q	L	K	T	H	I	N	A	T	P	X	D	I	A	S	N	P	K	K	L	K	I	V	E	L	D	A	A	Q	L	.	.	S	R	S
Template Known Secondary structure								S	S		S	S	G	G	G			T	.	.	T								S														T	T	S											G	G	G					T	T									G	G	G	G	.	.	G	G
Template Predicted Secondary structure																			.	.																																																									.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.			230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																																																																	.	.
Query SS confidence																																																																	.	.
Query Sequence		R	G	D	I	D	G	A	Y	V	W	A	P	A	V	N	A	L	E	K	D	G	K	V	L	T	D	S	E	Q	V	G	Q	W	G	A	P	T	L	D	V	W	V	V	R	K	D	F	A	E	K	H	P	E	V	V	K	A	F	A	K	S	A	I	.	.	D	A	Q	Q	P	Y	I	A	N	P	D	V	W
Query Conservation																																																																	.	.
Alig confidence																														.	.																	.	.																.	.
Template Conservation																														.	.																	.	.
Template Sequence		L	G	D	V	D	L	A	A	I	N	T	N	Y	A	I	P	A	G	L	S	P	S	R	D	A	L	L	T	.	.	E	G	P	N	S	P	Y	A	N	V	V	A	V	R	E	D	.	.	D	K	N	D	P	R	L	K	Q	L	V	S	A	L	H	S	P	A	V	L	S	A	A	K	K	I	F	G	D	G
Template Known Secondary structure		T	T	T		S										G	G	G	T			T	T	T	T		S			.	.			S	S	S	S									G	G	.	.	G	T	T												T	S												G	G	G
Template Predicted Secondary structure																														.	.																	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.			.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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