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Job Description | Q47537 | Confidence | 59.51% | Date | Thu Jan 5 12:36:50 GMT 2012 |
Rank | 173 | Aligned Residues | 138 |
% Identity | 15% | Template | c3onmB_ |
PDB info |
PDB header:transcription | Chain: B: PDB Molecule:transcriptional regulator lrha; |
PDBTitle: effector binding domain of lysr-type transcription factor rovm from y.2 pseudotuberculosis
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Resolution | 2.40 Å |
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24 | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
N | V | T | V | A | Y | Q | T | S | A | E | P | A | K | V | A | Q | A | D | N | T | F | A | K | E | S | G | A | T | V | D | W | R | K | F | D | S | G | A | S | I | V | R | A | L | A | S | G | D | V | Q | I | G | N | L | G | S | S | P | L | A | V | A | A | S | Q | Q | V | P | I | E | V | F | L | L | A | S | K | L | G |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
S | L | I | I | G | A | S | D | D | T | A | D | T | L | L | P | F | L | L | N | R | V | A | T | L | Y | P | L | A | I | D | V | R | V | K | R | S | . |
P | F | I | A | D | M | L | S | S | G | E | V | D | L | A | I | T | T | A | K | . |
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V | D | S | H | P | H | V | I | L | R | T | S | P | . |
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Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | |
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. | . | . | 160 | . | . | . | . | . | . | . | . | . | |
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104 | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
N | S | E | A | L | V | V | K | K | T | I | S | K | P | E | D | L | I | G | K | R | I | A | V | P | F | I | S | T | T | H | Y | S | L | L | A | A | L | K | H | W | G | I | K | P | G | Q | V | E | I | V | N | L | Q | P | P | A | I | I | A | A | W | Q | R | G | D | I | D | G | A | Y |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
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T | L | W | Y | C | S | V | D | Y | Q | F | Q | P | G | E | P | V | P | L | V | V | M | D | E | P | S | L | Y | R | E | M | A | I | E | H | L | T | Q | A | G | V | P | W | . |
R | I | A | Y | V | A | S | S | L | S | A | I | R | A | A | V | R | A | G | L | G | V | T | A | R |
Template Known Secondary structure |   |
. | . |  |  |  |  |  |  | T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
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171 | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | |
. | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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