Job Description Q47537 Confidence 98.20% Date Thu Jan 5 12:36:50 GMT 2012 Rank 51 Aligned Residues 202 % Identity 14% Template c3muqB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized conserved protein; PDBTitle: the crystal structure of a conserved functionally unknown protein from2 vibrio parahaemolyticus rimd 2210633 Resolution 2.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		V	N	V	T	V	A	Y	Q	T	S	A	E	P	A	K	V	A	Q	A	.	D	N	T	F	A	K	E	S	G	A	T	V	D	W	R	K	F	D	S	G	A	S	I	V	R	A	L	A	S	G	D	V	Q	I	G	N	L	G	S	S	P	L	A	V	A	A	S	Q	Q	V	P	I	E	V	F	L	L	A	S	K
Query Conservation																					.
Alig confidence																					.															.
Template Conservation																																				.
Template Sequence		E	H	V	R	L	A	T	T	T	S	T	Y	H	S	G	L	L	D	Y	L	L	P	Q	F	E	K	D	T	G	Y	K	V	D	V	.	I	A	A	G	T	G	K	A	L	K	X	G	E	N	G	D	V	D	L	V	X	T	H	A	P	K	A	E	G	T	F	V	E	K	G	Y	G	V	L	P	R	K	L	X	Y
Template Known Secondary structure																T	G	G	G	G	T															.														T	T	S	S	S																T	T	S
Template Predicted Secondary structure																																				.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120	.											.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.									.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.									.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	N	S	E	A	L	V	V	K	K	T	.	.	I	S	K	P	E	D	L	I	.	.	.	.	.	.	.	.	.	.	G	K	R	I	A	V	P	F	I	S	T	T	H	Y	S	L	L	A	A	L	K	H	W	G	I	K	P	G	Q	V	E	I	V	N	L	Q	P	P	A	I	I	A	A	W	Q	R	G	D
Query Conservation														.	.									.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.									.	.	.	.	.	.	.	.	.	.																																					.
Template Conservation																																																																						.
Template Sequence		N	D	F	V	I	V	G	P	K	A	D	P	A	K	I	K	D	D	E	S	V	L	D	V	F	K	E	I	A	N	K	N	A	T	F	I	S	R	G	D	D	S	G	T	H	K	K	E	X	G	F	W	A	Q	T	K	I	E	P	N	F	G	G	Y	R	S	V	G	.	Q	G	X	G	P	T	L	N	X	A	S
Template Known Secondary structure										T	T		T	T			T	T		S												T	T								S		S														T					S	T	T						.
Template Predicted Secondary structure																																																																						.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.			.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.
Query SS confidence																																																	.	.
Query Sequence		I	D	G	A	Y	V	W	A	P	A	V	N	A	L	E	K	D	G	K	V	L	T	D	S	E	Q	V	G	Q	W	G	A	P	T	L	D	V	W	V	V	R	K	D	F	A	E	K	.	.	H	P	E	V	V	K	A	F	A	K
Query Conservation																																																	.	.
Alig confidence																																																	.	.
Template Conservation
Template Sequence		E	X	Q	G	Y	T	X	S	D	R	G	T	W	L	A	Y	Q	N	K	L	D	L	E	I	L	F	Q	G	D	E	K	L	F	N	P	Y	Q	V	I	L	V	N	P	E	R	Y	P	T	I	N	Y	Q	G	A	K	A	F	S	D
Template Known Secondary structure				T														G	G	G		S									G	G	G											T	T	T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions