Job Description Q47537 Confidence 96.26% Date Thu Jan 5 12:36:50 GMT 2012 Rank 107 Aligned Residues 117 % Identity 9% Template c3mstA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:putative nitrate transport protein; PDBTitle: crystal structure of a putative nitrate transport protein (tvn0104)2 from thermoplasma volcanium at 1.35 a resolution Resolution 1.35 Å

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		122	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		G	K	R	I	A	V	P	F	.	I	S	T	T	H	Y	S	L	L	A	A	L	K	H	W	G	I	K	P	G	Q	V	E	I	V	N	L	Q	P	P	A	I	I	A	A	W	Q	R	G	D	I	D	G	A	Y	V	W	A	P	A	V	N	A	L	E	K	D	G	K	V	L	T	D	S	E	Q	V	G	Q	W	G
Query Conservation										.
Alig confidence										.																		.	.	.	.	.											.	.																	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.											.	.																	.	.	.	.	.	.
Template Sequence		S	G	R	I	Y	T	L	R	K	G	T	L	A	D	F	N	A	R	I	L	A	Y	Y	D	K	A	.	.	.	.	.	Q	V	I	N	A	D	G	D	T	C	.	.	I	K	X	A	N	E	G	Y	S	A	L	V	G	N	E	I	.	.	.	.	.	.	S	I	G	K	S	F	R	N	R	X	K	E	L	G	L
Template Known Secondary structure		S	S					S	S	T	T	S														T		.	.	.	.	.											.	.						T	T							T	T	T	.	.	.	.	.	.													T	T
Template Predicted Secondary structure																												.	.	.	.	.											.	.																	.	.	.	.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.						.	.	.	.	100	.	.	.	.	.			.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.							.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	T	L	D	V	W	V	V	R	K	D	F	A	E	K	H	P	E	V	V	K	A	F	A	K	S	A	I	D	A	Q	Q	P	Y	I	A	N	P	D	V	W	L	K	Q	P	E	N	I	S	K	L	A	R	L	S	G	V	P	E	G	D	V	P	G
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Template Sequence		D	L	P	S	C	A	X	A	S	T	R	R	I	D	E	.	.	.	.	.	.	.	.	V	I	E	A	Y	E	Q	G	I	D	F	I	K	N	N	H	E	.	.	.	.	.	.	R	A	A	E	I	I	S	K	K	S	G	Y	Y	S	E	E	V	X	K
Template Known Secondary structure											S	S					.	.	.	.	.	.	.	.																		.	.	.	.	.	.											S	S	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.									.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.							.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions