Job Description Q47537 Confidence 97.87% Date Thu Jan 5 12:36:50 GMT 2012 Rank 68 Aligned Residues 190 % Identity 17% Template c3h7mA_ PDB info PDB header:transferase Chain: A: PDB Molecule:sensor protein; PDBTitle: crystal structure of a histidine kinase sensor domain with2 similarity to periplasmic binding proteins Resolution 2.40 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	K	E	S	G	A	T	V	D	W	R	K	F	D	S	G	A	S	I	V	R	A	L	A	S	G	D	V	Q	I	G	N	L	G	S	S	P	L	A	V	A	A	S	Q	Q	V	P	I	E	V	F	L	L	A	S	K	L	G	N	S	E	A	L	V	V	K	K	T	I	S	K	P	E	D	L	I	G	K	R
Query Conservation
Alig confidence																		.																						.	.	.
Template Conservation																		.																						.	.	.
Template Sequence		I	A	E	V	M	G	M	T	V	E	F	R	L	G	A	W	.	S	E	M	F	S	A	L	K	S	G	R	V	D	V	L	Q	G	I	S	W	S	.	.	.	E	K	R	A	R	Q	I	D	F	T	P	P	H	T	I	V	Y	H	A	I	F	A	R	R	D	S	P	P	A	A	G	L	E	D	L	R	G	R	K
Template Known Secondary structure							T										G	.	G	G							T	T	S	S	S									.	.	.					T	T																		S	S	S				S	S	G	G	G	G	T	T	S
Template Predicted Secondary structure																		.																						.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.				.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	V	P	F	I	S	T	T	H	Y	S	L	L	A	A	L	K	H	W	G	I	K	P	G	Q	V	E	I	V	N	L	Q	P	P	A	I	I	A	A	W	Q	R	G	D	I	D	G	A	Y	V	W	A	P	A	V	N	A	L	E	K	D	G	K	V	L	T	D	S	E	Q	V	G	Q	W	G	A	P	T	L
Query Conservation
Alig confidence																		.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.
Template Sequence		V	A	L	H	R	D	G	I	M	H	E	Y	L	A	E	R	.	.	.	.	.	.	G	Y	G	K	D	L	V	L	T	P	T	P	A	D	A	L	R	L	L	A	A	G	G	C	D	Y	A	V	V	A	M	V	P	G	M	Y	I	I	R	E	N	R	L	T	N	L	V	P	V	A	R	S	I	A	A	Q	R	Y
Template Known Secondary structure						T	T	S								T	T	.	.	.	.	.	.	T		G	G	G					S	S										T	T	S	S	S																T	T		T	T
Template Predicted Secondary structure																		.	.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180							.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	W	V	V	R	K	D	F	A	E	K	H	P	E	V	V	K	A	F	A	K	S	A	I	D	A	Q	Q	P	Y	I	A	N	P	D	V	W	L	K	Q	P	E	N	I	S	K	L	A	R	L	S	G	V	P	E
Query Conservation
Alig confidence								.	.	.	.	.					.	.	.	.																	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.					.	.	.	.																	.	.	.	.	.	.	.
Template Sequence		G	Y	A	V	R	Q	.	.	.	.	.	G	D	A	E	.	.	.	.	L	L	A	R	F	S	E	G	L	A	I	L	R	K	T	G	.	.	.	.	.	.	.	Q	Y	E	A	I	R	A	K	W	L	G	V	L	E
Template Known Secondary structure							T	.	.	.	.	.	T				.	.	.	.																T	.	.	.	.	.	.	.									S	T	T
Template Predicted Secondary structure								.	.	.	.	.					.	.	.	.																	.	.	.	.	.	.	.
Template SS confidence
		239	240	.	.	.	.						.	.	.	.					.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.								.	.	.	.	.	270	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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