Job Description Q47537 Confidence 97.76% Date Thu Jan 5 12:36:50 GMT 2012 Rank 77 Aligned Residues 194 % Identity 11% Template c3delC_ PDB info PDB header:protein binding, transport protein Chain: C: PDB Molecule:arginine binding protein; PDBTitle: the structure of ct381, the arginine binding protein from the2 periplasm chlamydia trachomatis Resolution 1.92 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.											.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.						.
Query SS confidence															.	.	.	.	.	.	.	.	.	.						.
Query Sequence		N	V	T	V	A	Y	Q	T	S	A	E	P	A	.	.	.	.	.	.	.	.	.	.	K	V	A	Q	A	.	D	N	T	F	A	K	E	S	G	A	T	V	D	W	R	K	F	D	S	G	A	S	I	V	R	A	L	A	S	G	D	V	Q	I	G	N	L	G	S	S	P	L	A	V	A	A	S	Q	Q	V	P
Query Conservation															.	.	.	.	.	.	.	.	.	.						.
Alig confidence															.	.	.	.	.	.	.	.	.	.						.																		.																												.	.
Template Conservation																																																.																												.	.
Template Sequence		K	F	I	V	G	T	N	A	T	Y	P	P	F	E	F	V	D	K	R	G	E	V	V	G	F	D	I	D	L	A	R	E	I	S	N	K	L	G	K	T	L	D	V	R	E	F	.	S	F	D	A	L	I	L	N	L	K	Q	H	R	I	D	A	V	I	T	G	M	S	I	T	P	S	R	.	.	L	K	E	I
Template Known Secondary structure									S		B	T	T	T	B				T	T	S				S														T									.		G	G	G							T	T	S	S	S				S	S	B	B						.	.		T	T	S
Template Predicted Secondary structure																																																.																												.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	V	F	L	L	A	S	K	L	G	N	S	E	A	L	V	V	K	K	T	I	S	K	P	E	D	L	I	G	K	R	I	A	V	P	F	I	S	T	T	H	Y	S	L	L	A	A	L	K	H	W	G	I	K	P	G	Q	V	E	I	V	N	L	Q	P	P	A	I	I	A	A	W	Q	R	G	D	I	D	G
Query Conservation
Alig confidence																																																		.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.
Template Sequence		L	M	I	P	Y	Y	G	E	E	I	K	H	L	V	L	V	F	K	G	E	N	K	H	P	L	P	L	T	Q	Y	R	S	V	A	V	Q	T	G	T	Y	Q	E	A	Y	L	Q	S	L	.	.	.	.	.	.	.	S	E	V	H	I	R	S	F	D	S	T	L	E	V	L	M	E	V	M	H	G	K	S	P	V
Template Known Secondary structure												S								S			S					G	G	G	S	S						T	T	S									S	.	.	.	.	.	.	.	T	T							S	S										T	T	S	S	S
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.								160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	V	W	A	P	A	V	N	A	L	E	K	D	G	K	V	L	T	D	S	E	Q	V	G	Q	W	G	A	P	T	L	D	V	W	V	V	R	K	D	F	A	E	K	H	P	E	V	V	K	A	F	A	K	S	A	I	D
Query Conservation
Alig confidence																																										.	.	.
Template Conservation																																										.	.	.
Template Sequence		A	V	L	E	P	S	I	A	Q	V	V	L	K	D	F	P	A	L	S	T	A	T	I	D	L	P	E	D	Q	W	V	L	G	Y	G	I	G	V	A	S	.	.	.	D	R	P	A	L	A	L	K	I	E	A	A	V	Q	E
Template Known Secondary structure													G	G	G		T	T										G	G	G											T	.	.	.	T
Template Predicted Secondary structure																																										.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.				.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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