Job Description Q47537 Confidence 97.49% Date Thu Jan 5 12:36:50 GMT 2012 Rank 91 Aligned Residues 97 % Identity 16% Template c3chgB_ PDB info PDB header:ligand binding protein Chain: B: PDB Molecule:glycine betaine-binding protein; PDBTitle: the compatible solute-binding protein opuac from bacillus2 subtilis in complex with dmsa Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.				.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																																														.	.	.
Query SS confidence																																																														.	.	.
Query Sequence		N	V	T	V	A	Y	Q	T	S	A	E	P	A	K	V	A	Q	A	D	N	T	F	A	K	E	S	G	A	T	V	D	W	R	K	F	D	S	G	A	S	I	V	R	A	L	A	S	G	D	V	Q	I	G	N	L	G	S	S	P	L	.	.	.	A	V	A	A	S	Q	Q	V	P	I	E	V	F	L	L	A	S
Query Conservation																																																														.	.	.
Alig confidence																																							.																							.	.	.
Template Conservation																																							.
Template Sequence		K	I	N	L	A	Y	V	A	W	D	S	E	I	A	S	T	N	V	I	G	K	V	L	E	D	L	G	Y	E	V	T	L	T	Q	V	E	A	.	G	P	M	W	T	A	I	A	T	G	S	A	D	A	S	L	S	A	W	L	P	N	T	H	K	A	Y	A	A	K	Y	K	G	K	Y	D	D	I	G	T	S	M
Template Known Secondary structure																										T	T	T										T	.	T								T	T	S	S	S								T	T	T	T							T		T	T
Template Predicted Secondary structure																																							.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		K	L	G	N	S	E	A	L	V	V	K	.	.	K	T	I	S	K	P	E	D	L	I
Query Conservation													.	.
Alig confidence													.	.
Template Conservation
Template Sequence		T	G	V	K	M	G	L	V	V	P	Q	Y	M	K	N	V	N	S	I	E	D	L	K
Template Known Secondary structure												T	T		T	T			B	T	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions