Job Description Q47537 Confidence 84.31% Date Thu Jan 5 12:36:50 GMT 2012 Rank 146 Aligned Residues 203 % Identity 15% Template c2pt1A_ PDB info PDB header:metal transport Chain: A: PDB Molecule:iron transport protein; PDBTitle: futa1 synechocystis pcc 6803 Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.				70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																																		.	.	.																									.	.	.	.	.
Query SS confidence																																																		.	.	.																									.	.	.	.	.
Query Sequence		A	V	N	V	T	V	A	Y	Q	T	S	A	E	P	A	K	V	A	Q	A	D	N	T	F	A	K	E	S	G	A	T	V	D	W	R	K	F	D	S	G	A	S	I	V	R	A	L	A	.	.	.	S	G	D	V	Q	I	G	N	L	G	S	S	P	L	A	V	A	A	S	Q	Q	V	P	I	.	.	.	.	.
Query Conservation																																																		.	.	.																									.	.	.	.	.
Alig confidence								.																.																										.	.	.																									.	.	.	.	.
Template Conservation								.																.
Template Sequence		Q	Q	E	I	N	L	.	Y	S	S	R	H	Y	N	T	D	N	E	L	Y	A	K	.	F	T	A	E	T	G	I	K	V	N	L	I	E	G	K	A	D	E	L	L	E	R	I	K	S	E	G	A	N	S	P	A	D	V	L	L	T	V	D	L	A	R	L	W	R	A	E	E	D	G	I	F	Q	P	V	Q	S
Template Known Secondary structure								.			S				T	T								.																											G	G	G										S										T	T		B
Template Predicted Secondary structure								.																.
Template SS confidence
		44	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
																	94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.					.	.	.	.	.	.	.	.	120						.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.										.	.	.	.	.																											.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.										.	.	.	.	.																											.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	F	L	L	A	S	K	L	G	N	S	E	A	L	V	V	K	.	.	.	.	K	T	I	S	K	P	E	D	L	.	.	.	.	.	I	G	K	R	I	A	V	P	F	I	S	T	T	H	Y	S	L	L	A	A	L	K	H	W	G	I	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.										.	.	.	.	.																											.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.										.	.	.	.	.																											.	.	.
Template Conservation
Template Sequence		E	I	L	E	T	N	V	P	E	Y	L	R	S	P	D	G	M	W	F	G	F	T	K	R	A	R	V	I	M	Y	N	K	G	K	V	K	P	E	E	L	S	T	Y	E	E	L	A	D	P	K	W	K	G	R	V	I	I	R	S	S	S	N	E	Y	N	Q	S	L	V	A	S	L	V	V	A	D	G	E	E	S
Template Known Secondary structure								S		G	G	G	B		T	T	S	S															T	T	T			G	G	G				S	G	G	G	G	S	G	G	G	T	T		B					T	T	S
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
										147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.									190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure		.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	K	P	G	Q	V	E	I	V	N	L	Q	P	P	A	I	I	A	A	W	Q	R	G	D	I	D	G	A	Y	V	W	A	P	A	V	N	A	L	E	K	D	G	K	V	.	.	.	.	.	.	.	.	L	T	D	S	E	Q	V	G	Q	W	G	A	P	T	L	D	V	W	V	V	R
Query Conservation		.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	L	A	W	A	K	G	F	V	S	N	F	A	R	E	P	Q	G	N	D	T	A	Q	I	E	A	V	S	S	G	E	A	D	L	T	L	A	N	T	Y	Y	M	G	R	L	L	E	S	E	D	P	A	Q	K	A	I	A	E	N	V	G	V	F	F	P	N	Q	E	G	R	G	T	H	V	N	V	S	G	V	G
Template Known Secondary structure												T	B	S	S				S												T	S		S														T		S										T								T	T	T	T		B
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	F	A	E	K	H	P	E	V	V	K	A	F	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	K	T	A	P	N	R	E	G	A	V	K	F	I	E
Template Known Secondary structure			B	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions