Job Description Q47537 Confidence 99.95% Date Thu Jan 5 12:36:50 GMT 2012 Rank 16 Aligned Residues 230 % Identity 14% Template c1p99A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein pg110; PDBTitle: 1.7a crystal structure of protein pg110 from staphylococcus2 aureus Resolution 1.70 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		N	V	T	V	A	Y	Q	T	S	A	E	P	A	K	V	A	Q	A	D	N	T	F	A	K	E	S	G	A	T	V	D	W	R	K	F	D	S	G	A	S	I	V	R	A	L	A	S	G	D	V	Q	I	G	N	L	G	S	S	P	L	A	V	A	A	S	Q	Q	V	.	P	I	E	V	F	L	L	A	S	K	L
Query Conservation																																																																						.
Alig confidence																					.	.																																																.
Template Conservation																					.	.
Template Sequence		K	V	T	I	G	V	A	S	N	D	T	K	A	W	E	K	V	K	E	.	.	L	A	K	K	D	D	I	D	V	E	I	K	H	F	S	D	Y	N	L	P	N	K	A	L	N	D	G	D	I	D	M	N	A	F	Q	H	F	A	F	L	D	Q	Y	K	K	A	H	K	G	T	K	I	S	A	L	S	T	T	V
Template Known Secondary structure								S	S	S											.	.			G	G	G	T									S	S	T	T	S							T	T	S	S	S																		T	T
Template Predicted Secondary structure																					.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.																			.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	N	S	E	A	L	V	V	K	K	T	I	S	K	P	E	D	L	I	G	K	R	I	A	V	P	F	I	S	T	T	H	Y	S	L	L	A	A	L	K	H	W	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	P	G	Q	V	E	I	V	N	L	Q	P	P	A	I	I	A	A
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	P	L	G	I	Y	S	D	K	I	K	D	V	K	K	V	K	D	G	A	K	V	V	I	P	N	D	V	S	N	Q	A	R	A	L	K	L	L	E	A	A	G	L	I	K	L	K	K	D	F	G	L	A	G	T	V	K	D	I	T	S	N	P	K	H	L	K	I	T	A	V	D	A	Q	Q	T	A	R	A
Template Known Secondary structure										S	S		S		G	G	G			T	T								S														T	T	S					T	T			T	T			G	G	G					T	T									G	G	G	T	T	G	G
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.			.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.			230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																									.	.																																											.	.
Query SS confidence																									.	.																																											.	.
Query Sequence		W	Q	R	G	D	I	D	G	A	Y	V	W	A	P	A	V	N	A	L	E	K	D	G	.	.	K	V	L	T	D	S	E	Q	V	G	Q	W	G	A	P	T	L	D	V	W	V	V	R	K	D	F	A	E	K	H	P	E	V	V	K	A	F	A	K	S	A	I	.	.	D	A	Q	Q	P	Y	I	A	N	P	D
Query Conservation																									.	.																																											.	.
Alig confidence			.	.																					.	.																										.	.																.	.
Template Conservation			.	.																																																.	.
Template Sequence		L	.	.	S	D	V	D	I	A	V	I	N	N	G	V	A	T	K	A	G	K	D	P	K	N	D	P	I	F	L	E	K	S	N	S	D	A	V	K	P	Y	I	N	I	V	A	V	N	D	K	.	.	D	L	D	N	K	T	Y	A	K	I	V	E	L	Y	H	S	K	E	A	Q	K	A	L	Q	E	D	V	K
Template Known Secondary structure		G	.	.	G	T	S	S												T	T			T	T	T	S		S						S	S	G	G	G	G	G	G								G	G	.	.	G	T	T													S												T
Template Predicted Secondary structure			.	.																																																.	.
Template SS confidence
		198			.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	W	L	K	Q	P	E	N	I	S	K	L	A	R	L	S	G	V	P	E	G	D	V	P	G	L	V	K	G
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.
Template Sequence		D	G	.	.	.	.	.	.	.	.	.	.	E	K	P	V	N	L	S	K	D	E	I	K	A	I	E	T	S
Template Known Secondary structure		T	S	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		274	.											.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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