Job Description Q47537 Confidence 92.34% Date Thu Jan 5 12:36:50 GMT 2012 Rank 133 Aligned Residues 105 % Identity 14% Template c1ce2A_ PDB info PDB header:metal transport Chain: A: PDB Molecule:protein (lactoferrin); PDBTitle: structure of diferric buffalo lactoferrin at 2.5a resolution Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		46	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.									.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure								.																																																				.	.	.	.	.	.	.	.
Query SS confidence								.																																																				.	.	.	.	.	.	.	.
Query Sequence		A	K	E	S	G	A	.	T	V	D	W	R	K	F	D	S	G	A	S	I	V	R	A	L	A	S	G	D	V	Q	I	G	N	L	G	S	S	P	L	A	V	A	A	S	Q	Q	V	P	I	E	V	F	L	L	A	S	K	L	.	.	.	.	.	.	.	.	G	N	S	E	A	L	V	V	K	K	T	I	S	K
Query Conservation								.																																																				.	.	.	.	.	.	.	.
Alig confidence								.																																																				.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	K	K	L	G	A	P	S	I	T	C	V	R	R	A	S	V	L	E	C	I	R	A	I	T	E	K	K	A	D	A	V	T	L	D	G	G	M	V	F	E	A	G	R	D	P	Y	K	L	R	P	V	A	A	E	I	Y	G	T	K	E	S	P	Q	T	H	Y	Y	A	V	A	V	V	K	K	G	S	N	F	Q
Template Known Secondary structure				T	T			S								S	S										T	T	S			B													S	T	T	T													S	S	S			S										T	T
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		P	E	D	L	I	G	K	R	I	A	V	P	F	.	.	I	S	T	T	H	Y	S	L	L	A	A	L	K	H	W	G	I	K	P	G	Q
Query Conservation															.	.
Alig confidence															.	.
Template Conservation
Template Sequence		L	D	Q	L	Q	G	R	N	S	C	H	T	G	L	G	R	S	A	G	W	N	I	P	M	G	I	L	R	P	Y	L	S	W	T	E	S
Template Known Secondary structure		G	G	G		T	T						S		T	T		T	T	T	T							T								T	T
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions