Job Description P0AEQ3 Confidence 99.97% Date Thu Jan 5 11:23:56 GMT 2012 Rank 26 Aligned Residues 222 % Identity 20% Template d2a5sa1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.70

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.												.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.																														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.																														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	D	K	K	L	V	V	A	T	D	T	A	F	V	P	F	E	F	K	Q	.	G	D	K	Y	V	G	F	D	V	D	L	W	A	A	I	A	K	E	L	K	L	D	Y	E	L	K	P	M	D	.	.	.	.	.	.	.	.	.	.	.	F	S	G	I	I	P	A	L	Q	T	K	N	V	D	L	A	L	A
Query Conservation																							.																														.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.																														.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	N	T	V	P	C	R	K	F	V	K	I	N	N	S	T	N	E	G	M	N	V	K	K	C	C	K	G	F	C	I	D	I	L	K	K	L	S	R	T	V	K	F	T	Y	D	L	Y	L	V	T	N	G	K	H	G	K	K	V	N	N	V	W	N	G	M	I	G	E	V	V	Y	Q	R	A	V	M	A	V	G
Template Known Secondary structure		T	T										S	S	S	S	S	S											S														T										S	S	S	S					T	T											T	T	S		S				S
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130							.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.					.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.																							.	.	.	.
Query SS confidence																																											.	.	.	.	.	.																							.	.	.	.
Query Sequence		G	I	T	I	T	D	E	R	K	K	A	I	D	F	S	D	G	Y	Y	K	S	G	L	L	V	M	V	K	A	N	N	N	D	V	K	S	V	K	D	L	D	.	.	.	.	.	.	G	K	V	V	A	V	K	S	G	T	G	S	V	D	Y	A	K	A	N	I	K	T	.	.	.	.	K	D	L	R	Q	F	P
Query Conservation																																											.	.	.	.	.	.																							.	.	.	.
Alig confidence																																											.	.	.	.	.	.																							.	.	.	.
Template Conservation
Template Sequence		S	L	T	I	N	E	E	R	S	E	V	V	D	F	S	V	P	F	V	E	T	G	I	S	V	M	V	S	R	Q	V	T	G	L	S	D	K	K	F	Q	R	P	H	D	Y	S	P	P	F	R	F	G	T	V	P	N	G	S	T	E	R	N	I	R	N	N	Y	P	Y	M	H	Q	Y	M	T	R	F	N	Q	R
Template Known Secondary structure		S		B							T	T																						S	T	T	S					S	G	G	G	S	S	S								T	T	S								T	T									G	G	G			S
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.			.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.
Query SS confidence																																								.	.
Query Sequence		N	I	D	N	A	Y	M	E	L	G	T	N	R	A	D	A	V	L	H	D	T	P	N	I	L	Y	F	I	K	T	A	G	N	G	Q	F	K	A	.	.	V	G	D	S	L	E	A	Q	Q	Y	G	I	A	F	P	K	G	S	D	E	L	R	D	K	V	N	G	A	L	K	T	L	R	E	N	G	T	Y	N	E
Query Conservation																																								.	.
Alig confidence																																								.	.																				.
Template Conservation																																																													.
Template Sequence		G	V	E	D	A	L	V	S	L	K	T	G	K	L	D	A	F	I	Y	D	A	A	V	L	N	Y	K	A	G	R	D	E	G	C	K	L	V	T	I	G	S	G	Y	I	F	A	T	T	G	Y	G	I	A	L	Q	K	G	S	P	.	W	K	R	Q	I	D	L	A	L	L	Q	F	V	G	D	G	E	M	E	E
Template Known Secondary structure		S										T	T	S		S															T		T	T	S										G	G	G										T	T		T	.	T															T
Template Predicted Secondary structure																																																													.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		238	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	K	K	W	F	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	T	L	W	L	T
Template Known Secondary structure							T
Template Predicted Secondary structure
Template SS confidence
		275	.	.	.	.	280	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions