Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEQ3
Confidence25.19%DateThu Jan 5 11:23:56 GMT 2012
Rank119Aligned Residues164
% Identity12%Templated1h3da1
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution2.7

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   62.......70.........80.........90......... 100.........110.........120.........130.
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Query Sequence  KLDYELKPMDFSGIIPALQTKNVDLALAGITITDERKK. . . . . . . . . . AIDFSDGYYKSGLLVMVKANNNDVKSVKDLDG
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Template Sequence  NMPIDILRVRDDDIPGLVMDGVVDLGIIGENVLEEELLNRRAQGEDPRYFTLRRLDFGGCRLSLATPVDEAWDGPLSLNG
Template Known Secondary structure  SSS
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   45....50.........60.........70.........80.........90.........100.........110.........120....
 
   132.......140.........150.........160.........170.........180.........190.........200.........210.
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Query Sequence  KVVAVKSGTGSVDYAKANIKTKDLRQFPNIDNAYMELGTNRADAVLHDTPNILYFIKTAGNGQFKAVGDSLEAQQYGIAF
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Template Sequence  KRIATSYPHLLKRYLDQKGISFKSCLLNGSVEVAPRA. . GLADAICDLVSTGATLEANG. . . . LREVEVIYRSKACLIQR
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   125....130.........140.........150.........160. ........170.........180. ........190........
 
   212.. .....220.........230.
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Query Sequence  PKG. SDELRDKVNGALKTLRE
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Template Sequence  DGEMEESKQQLIDKLLTRIQG
Template Known Secondary structure  SS


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   199200.........210.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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