Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEQ3
Confidence76.63%DateThu Jan 5 11:23:56 GMT 2012
Rank83Aligned Residues175
% Identity17%Templatec3fxbB_
PDB info PDB header:transport proteinChain: B: PDB Molecule:trap dicarboxylate transporter, dctp subunit; PDBTitle: crystal structure of the ectoine-binding protein ueha
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   52.......60......... 70.........80.........90.........100.........110.
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Query Sequence  DLWAAIAKELKLDYELKP. . . . MDFSGIIPALQTKNVDLALAGITITDERKKAIDFSDGYYKSG. . . . . . . . . . . . . . . .
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Template Sequence  KFKEEIEANSDHEIQLFPYGTLGESADIMEQTQDGILQFVDQSPGFTGSLIPEAQVFFVPYLLPTDQDHLARFFKESKAI
Template Known Secondary structure  SSS



TTSS
STS
S

TTTSGGGGGGGSTT
S
S

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   21........30.........40.........50.........60.........70.........80.........90.........100
 
   112.......120.........130.........140.........150.........160.........170.
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Query Sequence  . . . . . . . . . . . . . . . . . . . . LLVMVKANNNDVKSVKDLDGKVVAVKSGTGSVDYAKANIKTKDLRQFPNIDNAYMELGTN
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Template Sequence  NDMFKPLYADQGLELLNMFPEGEVAMTTKTPVTTCSDLDEVKFRVMTNPLLVESYKAFGATPTPL. . . PWGEVYGGLQTN
Template Known Secondary structure  TTSTTTSS

SSGGGSTT

S
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GGGTT
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   101........110.........120.........130.........140.........150.........160..... ....170.......
 
   172.......180.........190.........200.........210.... .....220.........230.
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Query Sequence  RADAVLHDTPNILYFIKTAGNGQFKAVGDSLEAQQYGIAFPKG. . . . . SDELRDKVNGALKTLRE
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Template Sequence  VIQGQENPTFFL. . YSTKIYEVTDYITYAGHNNFTTAVMANKDFYDGLSAEDQQLVQNAALAAYD
Template Known Secondary structure  S

..TTGGGS





S
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   178.180......... 190.........200.........210.........220.........230.........240
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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