Job Description P0AEQ3 Confidence 69.65% Date Thu Jan 5 11:23:56 GMT 2012 Rank 89 Aligned Residues 174 % Identity 15% Template c3eq1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:porphobilinogen deaminase; PDBTitle: the crystal structure of human porphobilinogen deaminase at2 2.8a resolution Resolution 2.80 Å

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure																										.																		.	.
Query SS confidence																										.																		.	.
Query Sequence		V	D	L	W	A	A	I	A	K	E	L	K	L	D	Y	E	L	K	P	M	D	F	S	G	.	I	I	P	A	L	Q	T	K	N	V	D	L	A	L	A	G	I	.	.	T	I	T	D	E	R	K	K	A	I	D	F	S	D	G	Y	Y	K	S	G	L	L	V	M	V	K	A	N	N	N	D	V	K	S	V	K
Query Conservation																										.																		.	.
Alig confidence																										.																		.	.
Template Conservation
Template Sequence		T	D	S	V	V	A	T	L	K	A	S	Y	P	G	L	Q	F	E	I	I	A	F	T	K	E	L	E	H	A	L	E	K	N	E	V	D	L	V	V	H	S	L	K	D	L	P	T	V	L	P	P	G	F	T	I	G	A	I	C	K	R	E	N	P	H	D	A	V	V	F	H	P	K	F	V	G	K	T	L	E
Template Known Secondary structure													S	T	T																		T	T	S		S						G	G	G	S		S	S			T	T																				G	G	G	T	T			G	G
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.				.	.	200	.	.
Predicted Secondary structure																																		.										.																														.	.	.
Query SS confidence																																		.										.																														.	.	.
Query Sequence		D	L	D	G	K	V	V	A	V	K	S	G	T	G	S	V	D	Y	A	K	A	N	I	K	T	K	D	L	R	Q	F	P	.	N	I	D	N	A	Y	M	E	L	.	G	T	N	R	A	D	A	V	L	H	D	T	P	N	I	L	Y	F	I	K	T	A	G	N	G	Q	F	K	A	.	.	.	V	G	D	S	L
Query Conservation																																		.										.																														.	.	.
Alig confidence																																		.										.																														.	.	.
Template Conservation
Template Sequence		T	L	P	E	K	S	V	V	G	T	S	S	L	R	R	A	A	Q	L	Q	R	K	F	P	H	L	E	F	R	S	I	Q	G	N	L	N	T	R	L	R	K	L	D	E	Q	Q	E	F	S	A	I	I	L	A	T	A	G	L	Q	R	M	G	W	H	N	R	V	G	Q	I	L	H	P	E	E	C	M	Y	A	V
Template Known Secondary structure		G	S		T	T																			T	T	S							S											T	S	S	S		S													T		G	G	G							T	T	T			B		T
Template Predicted Secondary structure
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	Q	Q	Y	G	I	A	F	P	K	G	S	D	E	L	R	D	K	V	N	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Q	G	A	L	G	V	E	V	R	A	K	D	Q	D	I	L	D	L	V	G	V
Template Known Secondary structure		T	T	T								T	T									G	G
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions