Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEQ3
Confidence97.82%DateThu Jan 5 11:23:56 GMT 2012
Rank46Aligned Residues215
% Identity14%Templatec2x7pA_
PDB info PDB header:unknown functionChain: A: PDB Molecule:possible thiamine biosynthesis enzyme; PDBTitle: the conserved candida albicans ca3427 gene product defines a new2 family of proteins exhibiting the generic periplasmic binding3 protein structural fold
Resolution2.34 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.........60.........70. ........80.........90.........100
Predicted Secondary structure 

















..







..
Query SS confidence 














































. .




























. .
Query Sequence  KKLVVATDTAFVPFEFKQGDKYVGFDVDLWAAIAKELKLDYELKPMD. . FSGIIPALQTKNVDLALAGITITDERKKA. .
Query Conservation    
 
      

      
   
   

   
    
         ..          
  
               ..
Alig confidence 









..


.......
























..




























..
Template Conservation   

 

  
 ..   ....... 
  

   
 
   

 

      
      

  
  


       
     
 
Template Sequence  PTLKVAYIPE. . HFS. . . . . . . TPLFFAQQQGYYKAHDLSIEFVKVPEGSGRLINLLNSNEVDIAIGLTEAFIADIAKGN
Template Known Secondary structure 

B


S..GGG.......TTTT

B


TT
TTS
STT
Template Predicted Secondary structure 

..


.......
















Template SS confidence 















































































   2.......10. ... .....20.........30.........40.........50.........60.........70..
 
   101........110.........120.........130.........140....... ..150.........160.........170.
Predicted Secondary structure  ..






























.......







Query SS confidence  . .














































. . . . . . .























Query Sequence  . . IDFSDGYYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSVDYAK. . . . . . . ANIKTKDLRQFPNIDNAYMELGTN
Query Conservation  ..                                               .......                    
   
Alig confidence  ..














































.......























Template Conservation      
            
           

 

 
     

         
   

    
  
         

  
Template Sequence  ENIHVLDTYVKSPLLWAVSTGSNRDDVTDAKQLKRIGVSRIGSGSYVXSFVLAHQLGVPSFDQFQVLSNFKNLRDSVNLK
Template Known Secondary structure  TT
S

TT
TT

SSTT

SSTTSTS




SSTT
Template Predicted Secondary structure 





























Template SS confidence 















































































   73......80.........90.........100.........110.........120.........130.........140.........150..
 
   172....... 180.........190.........200.........210.... ... ..220.........230.. .......240
Predicted Secondary structure 



..
















....
....
.
Query SS confidence 







. .


































. . . .


. . . .














.







Query Sequence  RADAVLHD. . TPNILYFIKTAGNGQFKAVGDSLEAQQYGIAFPKG. . . . SDE. . . . LRDKVNGALKTLREN. GTYNEIYK
Query Conservation    
     ..                                 
 ....   ....
   

  
  
   .
    
  
Alig confidence 







..


































....


....














.







Template Conservation   


                    
                         
  
  
  
  

      

 

     
Template Sequence  DGVEGSDAFXWEYFTSKKYYDNHEIKQIDQIYTPWSSWVVATSSDSLQAKSDVIKNFIDAVNQGIQYYNEHVDEAIEYIS
Template Known Secondary structure  TTS


STTS
SS
SST
Template Predicted Secondary structure 





















Template SS confidence 















































































   153......160.........170.........180.........190.........200.........210.........220.........230..
 
   241.......
Predicted Secondary structure 





Query SS confidence 







Query Sequence  KWFGTEPK
Query Conservation 

 
 

 
Alig confidence 







Template Conservation         
Template Sequence  SNLDYSAE
Template Known Secondary structure  SS

Template Predicted Secondary structure 



Template SS confidence 







   233......240
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions