Job Description P0AEQ3 Confidence 98.18% Date Thu Jan 5 11:23:56 GMT 2012 Rank 38 Aligned Residues 215 % Identity 16% Template c2x26A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:periplasmic aliphatic sulphonates-binding protein; PDBTitle: crystal structure of the periplasmic aliphatic sulphonate2 binding protein ssua from escherichia coli Resolution 1.75 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.												.
Query SS confidence																																								.	.												.
Query Sequence		A	D	K	K	L	V	V	A	T	D	T	A	F	V	P	F	E	F	K	Q	G	D	K	Y	V	G	F	D	V	D	L	W	A	A	I	A	K	E	.	.	L	K	L	D	Y	E	L	K	P	M	D	.	F	S	G	I	I	P	A	L	Q	T	K	N	V	D	L	A	L	A	G	I	T	I	T	D	E	R	K	K
Query Conservation																																								.	.												.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.													.	.												.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	P	E	A	L	R	I	G	Y	Q	K	G	S	I	G	.	.	.	.	.	.	.	.	.	.	.	M	V	L	A	K	S	H	Q	L	L	E	K	R	Y	P	E	S	K	I	S	W	V	E	F	P	A	G	P	Q	M	L	E	A	L	N	V	G	S	I	D	L	G	S	T	G	D	I	P	P	I	F	A	Q	A
Template Known Secondary structure				S								T	T				.	.	.	.	.	.	.	.	.	.	.							T	T							T	T	S								S	S											T	S		S						S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.												40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		100	.	.	.	.	.	.	.	.					.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.							.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.																																								.	.	.	.	.	.
Query SS confidence											.	.	.	.																																								.	.	.	.	.	.
Query Sequence		A	I	D	F	S	D	G	Y	Y	.	.	.	.	K	S	G	L	L	V	M	V	K	A	N	N	N	D	V	K	S	V	K	D	L	D	G	K	V	V	A	V	K	S	G	T	G	S	V	D	Y	A	K	.	.	.	.	.	.	A	N	I	K	T	K	D	L	R	Q	F	P	N	I	D	N	A	Y	M	E	L	G
Query Conservation											.	.	.	.																																								.	.	.	.	.	.
Alig confidence											.	.	.	.																																								.	.	.	.	.	.
Template Conservation
Template Sequence		A	G	A	D	L	V	Y	V	G	V	E	P	P	K	P	K	A	E	V	I	L	V	A	E	N	S	P	I	K	T	V	A	D	L	K	G	H	K	V	A	F	Q	K	G	S	S	S	H	N	L	L	L	R	A	L	R	Q	A	G	L	K	F	T	D	I	Q	P	T	Y	L	T	P	A	D	A	R	A	A	F	Q
Template Known Secondary structure		T	T													G	G	G							T	T		S			S	G	G	G	G	T	T	S						T	T	S													T	T			G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.				.	.	.	.					.	.	220	.	.	.	.	.	.	.	.	.	230	.	.		.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																														.	.	.					.	.	.	.																.
Query SS confidence																																														.	.	.					.	.	.	.																.
Query Sequence		T	N	R	A	D	A	V	L	H	D	T	P	N	I	L	Y	F	I	K	T	A	G	N	G	Q	F	K	A	V	G	D	S	L	E	A	Q	Q	Y	G	I	A	F	P	K	.	.	.	G	S	D	E	.	.	.	.	L	R	D	K	V	N	G	A	L	K	T	L	R	E	N	.	G	T	Y	N	E	I	Y	K	K
Query Conservation																																														.	.	.					.	.	.	.																.
Alig confidence																																														.	.	.					.	.	.	.																.
Template Conservation
Template Sequence		Q	G	N	V	D	A	W	A	I	W	D	P	Y	Y	S	A	A	L	L	Q	G	G	V	R	V	L	K	D	G	T	D	L	N	Q	T	G	S	F	Y	L	A	A	R	P	Y	A	E	K	N	G	A	F	I	Q	G	V	L	A	T	F	S	E	A	D	A	L	T	R	S	Q	R	E	Q	S	I	A	L	L	A	K
Template Known Secondary structure		T	T	S	S	S						T	T									S	S							S	T	T	S																	T																					T
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		242	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	F	G	T	E	P	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	M	G	L	P	A	P
Template Known Secondary structure				T
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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