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Job DescriptionP0AEQ3
Confidence99.97%DateThu Jan 5 11:23:56 GMT 2012
Rank19Aligned Residues230
% Identity21%Templatec2q89A_
PDB info PDB header:transport proteinChain: A: PDB Molecule:putative abc transporter amino acid-binding protein; PDBTitle: crystal structure of ehub in complex with hydroxyectoine
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40.. .......50.........60.........70. ........80.........90....
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Query Sequence  AVSSHAADKKLVVATDTAFVPFEFKQ. GDKYVGFDVDLWAAIAKELKLDYELKPMD. FSGIIPALQTKNVDLALAGITIT
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Template Sequence  KLEELKEQGFARIAIA. NEPPFTAVGADGKVSGAAPDVAREIFKRLGVADVVASISEYGAMIPGLQAGRHDAITAGLFMK
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TTTS
TT

STT



GGGTTS
S
S

B

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   4.....10......... 20.........30.........40.........50.........60.........70.........80..
 
   95....100.........110.........120.........130.........140. ........150.........160.........
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Query Sequence  DERKKAIDFSDGYYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTG. . . . . SVDYAKANIKTKDLRQFPNIDNAYMELG
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Template Sequence  PERCAAVAYSQPILCDAEAFALKKGNPLGLKSYKDIADNPDAKIGAPGGGTEEKLALEAGVPRDRVIVVPDGQSGLKMLQ
Template Known Secondary structure  TTS
S



TT
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BT
TT


TTST

GGG
SS
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   170.........180.........190.........200 .........210.........220.........230.........240.. ....
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Query Sequence  TNRADAVLHDTPNILYFIKTAGNGQFKAVGD. . SLEAQQYGIAFPKGSDELRDKVNGALKTLRENGTYNEIYKKW. FGTE
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Template Sequence  DGRIDVYSLPVLSINDLVSKANDPNVEVLAPVEGAPVYCDGAAFRKGDEALRDAFDVELAKLKESGEFAKIIEPYGFSAK
Template Known Secondary structure  TS
ST
TT
S
BT


B


GGGTGGGT

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   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   247
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Query Sequence  P
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Template Sequence  A
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   243
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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