Job Description P0AEQ3 Confidence 46.17% Date Thu Jan 5 11:23:56 GMT 2012 Rank 103 Aligned Residues 174 % Identity 13% Template c2pfyA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:putative exported protein; PDBTitle: crystal structure of dctp7, a bordetella pertussis2 extracytoplasmic solute receptor binding pyroglutamic acid Resolution 1.95 Å

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.							.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																						.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	L	W	A	A	I	A	K	E	L	K	L	D	Y	E	L	K	P	M	D	.	.	.	.	.	.	F	S	G	I	I	P	A	L	Q	T	K	N	V	D	L	A	L	A	G	I	T	I	T	D	E	R	K	K	A	I	D	F	S	D	G	Y	Y	K	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																						.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	F	A	D	E	V	K	A	A	T	A	G	A	L	E	I	K	V	Q	S	N	S	T	L	L	K	R	P	E	V	K	R	G	V	Q	Q	G	V	V	Q	I	G	E	V	L	V	S	A	L	G	N	E	D	P	L	F	E	I	D	S	V	P	F	L	A	S	S	F	N	E	S	E	K	L	W	K	A	T	R	P
Template Known Secondary structure											T	T	T	S								T	T	S	S	S		G	G	G								T	S	S	S						G	G	G	G	T	T	T		G	G	G	G	G	G	G	S	T	T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
																				112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	V	M	V	K	A	N	N	N	D	V	K	S	V	K	D	L	D	G	K	V	V	A	V	K	S	G	T	G	S	V	D	Y	A	K	A	N	I	K	T	K	D	L	R	Q	F	P	N	I	D	N	A	Y	M	E	L	G	T	N	R	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.															.	.	.
Template Conservation																																																		.															.	.	.
Template Sequence		L	L	A	Q	R	L	D	K	Q	G	I	V	L	V	Y	G	S	P	W	P	P	Q	G	I	Y	T	K	K	P	V	A	A	L	A	D	L	K	G	T	R	F	R	A	Y	S	A	S	T	.	S	H	X	A	A	L	X	G	A	V	P	T	T	V	.	.	.	Q	T	P	E	V	P	Q	A	F	S	T	G	V	I
Template Known Secondary structure									T	T	T																	S	S			S	S	G	G	G	G	T	T							S				.							T	T	S						.	.	.		G	G	G							T	T	S
Template Predicted Secondary structure																																																		.															.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.				.	.	.	.	.	.	170	.	.	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.						.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																																											.	.	.	.	.
Query SS confidence																																											.	.	.	.	.
Query Sequence		D	A	V	L	H	D	T	P	N	I	L	Y	F	I	K	T	A	G	N	G	Q	F	K	A	V	G	D	S	L	E	A	Q	Q	Y	G	I	A	F	P	K	G	.	.	.	.	.	S	D	E	L	R	D	K	V	N	G	A	L	K	T	L	R	E
Query Conservation																																											.	.	.	.	.
Alig confidence															.	.																											.	.	.	.	.
Template Conservation															.	.
Template Sequence		D	A	X	L	T	S	P	A	T	G	V	D	S	.	.	Q	A	W	D	Y	V	K	Y	Y	Y	D	A	Q	A	F	I	P	Q	S	F	V	I	A	N	K	R	A	F	Q	R	L	P	A	E	V	R	Q	A	V	L	D	A	G	A	K	A	E	I
Template Known Secondary structure		S	B											T	.	.	T	G	G	G	T																										S
Template Predicted Secondary structure															.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190			.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions