Job Description P0AAJ5 Confidence 8.83% Date Thu Jan 5 11:13:06 GMT 2012 Rank 95 Aligned Residues 31 % Identity 26% Template c3k7aM_ PDB info PDB header:transcription Chain: M: PDB Molecule:transcription initiation factor iib; PDBTitle: crystal structure of an rna polymerase ii-tfiib complex Resolution 3.80 Å

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		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	D	G	C	M	H	C	S	D	P	G	C	L	K	A	C	P	A	E	G	A	I	I	Q	Y	A	N	G	I	V	D	F	Q	S	E	Q	C	I	G	C	G	Y
Query Conservation
Alig confidence											.	.	.	.	.	.	.																	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.																	.	.	.	.	.
Template Sequence		I	V	L	T	C	P	E	C	K	.	.	.	.	.	.	.	V	Y	P	P	K	I	V	E	R	F	S	E	G	D	V	V	.	.	.	.	.	C	A	L	C	G	L
Template Known Secondary structure							S	T	T		.	.	.	.	.	.	.		S								S	S	S		S			.	.	.	.	.		S	S	S
Template Predicted Secondary structure											.	.	.	.	.	.	.																	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.								.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.						.	.	.	.	.	50

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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