Job Description P0AAJ5 Confidence 100.00% Date Thu Jan 5 11:13:06 GMT 2012 Rank 6 Aligned Residues 190 % Identity 35% Template c2vpyB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nrfc protein; PDBTitle: polysulfide reductase with bound quinone inhibitor,2 pentachlorophenol (pcp) Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	A	K	L	I	D	V	T	T	C	I	G	C	K	A	C	Q	V	A	C	S	E	W	N	D	I	R	D	T	V	G	N	N	I	G	V	Y	D	N	P	N	D	L	S	A	K	S	W	T	V	M	R	F	S	E	V	E	Q	N	D	K	L	E	W	L	I	R	K	D	G	C	M	H	C	S	D	P	G	C
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	Y	A	M	A	I	D	L	S	L	C	V	G	C	A	A	C	A	V	A	C	K	M	E	N	E	V	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	F	N	L	W	I	R	E	R	E	V	G	E	Y	P	N	L	V	V	E	F	R	P	E	Q	C	L	H	C	E	N	P	P	C
Template Known Secondary structure									T	T	T															T				T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T			S											T	T	S														S	S		T	T
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.																	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	A	C	P	A	E	G	A	I	I	Q	Y	A	N	G	I	V	D	F	Q	S	E	Q	C	I	G	C	G	Y	C	I	A	G	C	P	F	D	I	P	R	L	N	P	E	D	N	R	V	Y	K	C	T	L	C	V	D	R	V	V	V	G	Q	E	P	A	C	V	K	T	C	P	T	G	A	I	H	F	G	T
Query Conservation
Alig confidence									.																																						.
Template Conservation									.																																						.
Template Sequence		V	P	V	C	P	T	G	.	A	S	Y	Q	T	K	D	G	L	V	L	V	D	P	K	K	C	I	A	C	G	A	C	I	A	A	C	P	Y	D	A	R	Y	L	H	P	A	.	G	Y	V	S	K	C	T	F	C	A	H	R	L	E	K	G	K	V	P	A	C	V	E	T	C	P	T	Y	C	R	T	F	G	D
Template Known Secondary structure		T	T	T		S	S	S	.						T	T	S						T	T	T												T	T							T	T	.	S	S						T	T						T	T								S		T	T
Template Predicted Secondary structure									.																																						.
Template SS confidence
		67	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	S	M	K	T	L	A	S	E	R	V	A	E	L	K	T	R	G	Y	D	N	A	G	L	Y	D	P	A	G	V	G	G	T	H	V	M	Y	V	L	H	H	A	D	K	P	N	L	Y	H	G	L	P	E	N	P	E	I
Query Conservation
Alig confidence																		.	.	.	.	.																									.	.	.	.	.
Template Conservation																		.	.	.	.	.																									.	.	.	.	.
Template Sequence		L	E	D	P	E	S	P	V	A	K	A	L	K	A	A	E	.	.	.	.	.	R	V	D	V	L	R	P	E	Q	G	T	R	P	K	L	F	Y	L	N	A	P	S	K	K	.	.	.	.	.	G	L	T	R	E	S	E	V
Template Known Secondary structure		T	T		T	T	S										S	.	.	.	.	.					S	S	T	T	S	S				S					S		S	S	T	T	.	.	.	.	.		S			G	G	G
Template Predicted Secondary structure																		.	.	.	.	.																									.	.	.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160						.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.						.	.	.	.	.	190	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions