Return to main results Retrieve Phyre Job Id

Job DescriptionP68187
Confidence99.46%DateThu Jan 5 12:10:57 GMT 2012
Rank78Aligned Residues154
% Identity13%Templated1ye8a1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain)
Resolution1.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.........60.........70.........80.........90.........100.........110.
Predicted Secondary structure 











































Query SS confidence 















































































Query Sequence  VVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVIN
Query Conservation    
 
 








  
 

  
  
 
   
  
         
  
 
   
   


 


               
Alig confidence 







































.....
























..........
Template Conservation 


 

 
 




   

  
    
 
           .....                         ..........
Template Sequence  IIITGEPGVGKTTLVKKIVERLGKRAIGFWTEEVRRTGFR. . . . . IITTEGKKKIFSSKFFTSKKLVGSY. . . . . . . . . .
Template Known Secondary structure 

TTSSGGG


.....TT

TT


SSTT..........
Template Predicted Secondary structure 















.....










..........
Template SS confidence 















































































   3......10.........20.........30.........40.. .......50.........60.......
 
   112.......120.........130.........140.........150.........160.........170.........180.........190.
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  QRVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVT
Query Conservation             
          




 


 




   
 






 
 

      
   
  
    
 


 

Alig confidence  ..............







































..











.










Template Conservation  ..............                                

      ..            .           
Template Sequence  . . . . . . . . . . . . . . GVNVQYFEELAIPILERAYREAKKDRRKVIIIDEIGKXEL. . FSKKFRDLVRQI. XHDPNVNVVAT
Template Known Secondary structure  ..............

TT



STTGG..G
.T
TTS
Template Predicted Secondary structure  ..............















..

.




Template SS confidence 















































































   74.....80.........90.........100.........110... ......120..... ....130......
 
   192.......200.........210.......
Predicted Secondary structure 







Query SS confidence 

























Query Sequence  HDQVEAMTLADKIVVLDAGRVAQVGK
Query Conservation 
   
     


 

  
 
   
 
Alig confidence 

























Template Conservation                      

 
  
Template Sequence  IPIRDVHPLVKEIRRLPGAVLIELTP
Template Known Secondary structure 

SS

ST
TT


T
Template Predicted Secondary structure 






Template SS confidence 

























   137..140.........150.........160..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions