Job Description P32125 Confidence 99.38% Date Thu Jan 5 11:49:12 GMT 2012 Rank 59 Aligned Residues 150 % Identity 7% Template c2r6fA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:excinuclease abc subunit a; PDBTitle: crystal structure of bacillus stearothermophilus uvra Resolution 3.20 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		L	L	A	F	A	A	W	S	G	T	G	K	T	T	L	L	K	K	L	I	P	A	L	C	A	R	G	I	R	P	G	L	I	K	H	T	H	H	D	M	D	V	D	K	P	G	K	D	.	S	Y	E	L	R	K	A	G	A	A	Q	T	I	V	A	S	Q	Q	R	W	A	L	M	T	E	T	P	D	E	E	E
Query Conservation																																																		.
Alig confidence																																																		.
Template Conservation
Template Sequence		K	K	G	R	F	S	F	N	V	K	G	G	R	C	E	A	C	H	G	D	G	I	I	K	I	E	X	H	F	L	P	D	V	Y	V	P	C	E	V	C	H	G	K	R	Y	N	R	E	T	L	E	V	T	Y	K	G	K	N	I	A	E	V	L	D	X	T	V	E	D	A	L	D	F	F	A	S	I	P	K	I
Template Known Secondary structure			T	T	T	T		T	T	S	T	T	T	B		T	T	T	T	T		S							S	S	S								T	T	T	T	T			B		T	T	G	G	G			B	T	T	B							T	S	B								T		S
Template Predicted Secondary structure
Template SS confidence
		723	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.				130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																.																													.	.	.
Query SS confidence																.																													.	.	.
Query Sequence		L	D	L	Q	F	L	A	S	R	M	D	T	S	K	.	L	D	L	I	L	V	E	G	F	K	H	E	E	I	A	K	I	V	L	F	R	D	G	A	G	H	R	P	.	.	.	E	E	L	V	I	D	R	H	V	I	A	V	A	S	D	V	P	L	N	L	D	V	A	L	L	D	I	N	D	V	E	G	L	A
Query Conservation																.																													.	.	.
Alig confidence																.																													.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	R	K	L	E	T	L	Y	D	V	G	L	G	Y	X	K	L	G	Q	P	A	T	T	L	S	G	G	E	A	Q	R	V	K	L	A	A	E	L	H	R	R	S	N	G	R	T	L	Y	I	L	D	E	P	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	L	H	V	D	D	I	A	R	L	L
Template Known Secondary structure											T	T		S	S	S	B	T	T			G	G	G																S	S				S									T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		803	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.															.	.	.	860	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	V	V	E	W	M	Q	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	L	H	R	L	V	D	N
Template Known Secondary structure										T
Template Predicted Secondary structure
Template SS confidence
		869	870	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions