Job Description P32125 Confidence 99.76% Date Thu Jan 5 11:49:12 GMT 2012 Rank 26 Aligned Residues 152 % Identity 13% Template c2pcjB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:lipoprotein-releasing system atp-binding protein lold; PDBTitle: crystal structure of abc transporter (aq_297) from aquifex aeolicus2 vf5 Resolution 1.70 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.					.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.					.	80
Predicted Secondary structure																																															.	.	.	.																										.	.	.	.
Query SS confidence																																															.	.	.	.																										.	.	.	.
Query Sequence		L	L	A	F	A	A	W	S	G	T	G	K	T	T	L	L	K	K	L	I	P	A	L	C	A	R	G	I	R	P	G	L	I	K	H	T	H	H	D	M	D	V	D	K	P	.	.	.	.	G	K	D	S	Y	E	L	R	K	A	G	A	A	Q	T	I	V	A	S	Q	Q	R	W	A	L	.	.	.	.	M	T
Query Conservation																																															.	.	.	.																										.	.	.	.
Alig confidence																																															.	.	.	.																										.	.	.	.
Template Conservation
Template Sequence		F	V	S	I	I	G	A	S	G	S	G	K	S	T	L	L	Y	I	L	G	L	L	D	A	P	T	E	G	K	V	F	L	E	G	K	E	V	D	Y	T	N	E	K	E	L	S	L	L	R	N	R	K	L	G	F	V	F	Q	F	H	Y	L	I	P	E	L	T	A	L	E	N	V	I	V	P	M	L	K	M	G
Template Known Secondary structure									T	T	S										T	T	S	S			S							T	T					T	T																		S	S					T	T	S													T	T
Template Predicted Secondary structure
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	P	D	E	E	E	L	D	L	Q	F	L	A	S	R	M	D	T	S	K	L	D	L	I	L	V	E	G	F	K	H	E	E	I	A	K	I	V	L	F	R	D	G	A	G	H	R	P	E	E	L	V	I	D	R	H	V	I	A	V	A	S	D	V	P	L	N	L	D	V	A	L	L	D	I	N	D	V	E
Query Conservation
Alig confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	P	K	K	E	A	K	E	R	G	E	Y	L	L	S	E	L	G	L	G	D	K	L	S	R	K	P	Y	E	L	S	G	G	E	Q	Q	R	V	A	I	A	R	A	L	A	N	E	P	I	L	L	F	A	D	E	P	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	L	D	S	A	N	T	K
Template Known Secondary structure																		T	T		T	T		T	T			G	G	G	S															T	T			S						S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.															.	170	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	A	D	F	V	V	E	W	M	Q	K	Q	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	V	M	D	I	F	L	K	I	N	E	G	G	T
Template Known Secondary structure													T	T
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions