Return to main results Retrieve Phyre Job Id

Job DescriptionP32125
Confidence99.69%DateThu Jan 5 11:49:12 GMT 2012
Rank40Aligned Residues146
% Identity14%Templatec2hydB_
PDB info PDB header:transport proteinChain: B: PDB Molecule:abc transporter homolog; PDBTitle: multidrug abc transporter sav1866
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60.........70.........80........
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Query Sequence  LLAFAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDMDVDKPGKDSYELRKAGAAQTIVASQQRWALMTETPDEEEL
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Template Sequence  TVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSD. TVKENILL. . GRPTATDE
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STTSSTTTTTSS

STTGGGS
T
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SS.BGG..G
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   369370.........380.........390.........400.........410.........420......... 430....... ..440.....
 
   8990.........100........ .110.........120.........130.........140.........150.......
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Query Sequence  DLQFLASRMDTSKLDLILVE. . . . . . . . . . . GFKHEEIAKIVLFRDGAGHRPEELVIDRHVIAVASDVPLNLDVALLDIN
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Template Sequence  EVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEAT. . . . . . . . . . . . . . SALDLE
Template Known Secondary structure  TT
TSTTGGG
B

GGGTTS


SSTT..............TT

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   446...450.........460.........470.........480.........490.........500..... ....510.
 
   158.160.........170.
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Query Sequence  DVEGLADFVVEWMQ
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Template Sequence  SESIIQEALDVLSK
Template Known Secondary structure  TT
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   512.......520.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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