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Job DescriptionP32125
Confidence99.82%DateThu Jan 5 11:49:12 GMT 2012
Rank7Aligned Residues152
% Identity13%Templatec1q1bD_
PDB info PDB header:transport proteinChain: D: PDB Molecule:maltose/maltodextrin transport atp-binding protein malk; PDBTitle: crystal structure of e. coli malk in the nucleotide-free form
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.. .......60.........70.........80......
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Query Sequence  LLAFAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDMDVDK. . PGKDSYELRKAGAAQTIVASQQRWALMTETPDEE
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Template Sequence  FVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVI
Template Known Secondary structure 
SGGGSTTTSS


SSTT
TT

SSTT



B
S




TTS
TTTTTTSSSSTTTTT
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   31........40.........50.........60.........70.........80.........90.........100.........110
 
   87..90.........100.........110.........120.........130.........140.........150.........160......
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Query Sequence  ELDLQFLASRMDTSKLDLILVEGFKHEEIAKIVLFRDGAGHRPEELVIDRHVIAVASDVPLNLDVALLDINDVEGLADFV
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Template Sequence  NQRVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPL. . . . . . . . . . . . . . SNLDAALRVQMRIEI
Template Known Secondary structure  TTTTGGGT
TT
SS



GGGTTTSSSSTTTT

S
BSSTT..............TT

TTT
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   111........120.........130.........140.........150.........160. ........170......
 
   167..170....
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Query Sequence  VEWMQKQN
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Template Sequence  SRLHKRLG
Template Known Secondary structure  TT
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   177..180....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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