Job Description P32125 Confidence 97.09% Date Thu Jan 5 11:49:12 GMT 2012 Rank 426 Aligned Residues 156 % Identity 10% Template c1mj1A_ PDB info PDB header:ribosome Chain: A: PDB Molecule:elongation factor tu; PDBTitle: fitting the ternary complex of ef-tu/trna/gtp and ribosomal proteins2 into a 13 a cryo-em map of the coli 70s ribosome Resolution 13.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	T	M	I	P	L	L	A	F	A	A	W	S	G	T	G	K	T	T	L	L	K	K	L	I	P	A	L	C	A	R	G	I	R	P	G	L	I	K	H	T	H	H	D	M	D	V	D	K	P	G	K	D	S	Y	E	L	R	K	A	G	A	A	Q	T	I	V	A	S	Q	Q	R	W	A	L	M	T	E	T
Query Conservation
Alig confidence																																																							.	.	.
Template Conservation																																																							.	.	.
Template Sequence		R	T	K	R	H	V	N	V	G	T	I	G	H	V	D	H	G	K	T	T	L	T	A	A	L	T	Y	V	A	A	A	E	N	R	N	V	E	V	K	D	Y	G	D	I	D	K	A	R	E	E	R	A	R	.	.	.	G	I	T	I	N	T	A	H	V	E	Y	E	T	A	K	R	H	Y	S	H	V	D	C	R
Template Known Secondary structure				S										S	T	T	S	S																S	T	T										S		S						T	.	.	.	T	S			S									S	S
Template Predicted Secondary structure																																																							.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.				60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	E	E	E	L	D	L	Q	F	L	A	S	R	M	D	T	S	K	L	D	L	I	L	V	E	G	F	K	H	E	E	I	A	K	I	V	L	F	R	D	G	A	G	H	R	P	E	E	L	V	I	D	R	H	V	I	A	V	A	S	D	V	P	L	N	L	D	V	A	L	L	D	I	N	D	V	E	G	L
Query Conservation
Alig confidence						.	.																																				.	.	.	.	.	.																					.	.	.	.	.
Template Conservation						.	.																																				.	.	.	.	.	.																					.	.	.	.	.
Template Sequence		G	H	A	D	.	.	Y	I	K	N	M	I	T	G	A	A	Q	M	D	G	A	I	L	V	V	S	A	A	D	G	R	M	R	Q	T	R	E	H	I	L	L	.	.	.	.	.	.	A	R	Q	V	G	V	R	Y	I	V	V	F	M	N	K	V	D	M	V	D	.	.	.	.	.	D	R	E	L	L	D	L	V
Template Known Secondary structure			S	G	G	.	.	G									T	T		S	S							T	T	T		S											.	.	.	.	.	.				T	T											G	G	G			.	.	.	.	.
Template Predicted Secondary structure						.	.																																				.	.	.	.	.	.																					.	.	.	.	.
Template SS confidence
		84	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.							.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.						.	.	.	.	.	.	.	150
		163	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	F	V	V	E	W	M	Q	K	Q	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	M	E	V	R	D	L	L	N	Q	Y	E
Template Known Secondary structure												T	T
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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