Return to main results Retrieve Phyre Job Id

Job DescriptionP38035
Confidence99.45%DateThu Jan 5 11:57:48 GMT 2012
Rank38Aligned Residues221
% Identity14%Templated1sxjd2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   183......190.........200.........210.........220.........230. ........240.........250.........260.
Predicted Secondary structure 



















.













Query SS confidence 
















































.





























Query Sequence  KSGIATRNPHFNRMIEQIEKVAIKSRAPILLNGPTGAGKSFLARRILEL. KQARHQFSGAFVEVNCATLRGDTAMSTLFG
Query Conservation     

                
     
    
  
 

   
   
  .
    
   


 
 
  
        


Alig confidence 



















...

























.





























Template Conservation    



 
     
   
  ...     


 

 
 


 

  

                                 
Template Sequence  LDEVTAQDHAVTVLKKTLKS. . . ANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKN
Template Known Secondary structure  TTT

S

TTTT
...TT



STTSSTTS
SSS


TT
Template Predicted Secondary structure 



...























Template SS confidence 















































































   36...40.........50..... ....60.........70.........80.........90.........100.........110..
 
   262.......270.........280.........290.........300.........310.........320.........330.........340.
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  HVKGAFTGARESREGLLRSANGGMLFLDEIGELGADEQAMLLKAIEEKTFYPFGSDRQVSSDFQLIAGTVRDLRQLVAEG
Query Conservation         
      
 
  
 



 



  
    
  

  
      
 
        



 

   
      
Alig confidence 
















































...........










.......

Template Conservation                         
   
                     ...........     
     .......  
Template Sequence  FARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYS. . . . . . . . . . . GVTRFCLICNY. . . . . . . VT
Template Known Secondary structure  S





TTS


S
TTGGGS
TT...........TTS
.......GG
Template Predicted Secondary structure 







...........



.......
Template SS confidence 















































































   113......120.........130.........140.........150.........160. ........170.. ..
 
   342.......350.........360.........370.........380.........390.........400.........410.........420.
Predicted Secondary structure 






















Query SS confidence 















































































Query Sequence  KFREDLYARINLWTFTLPGLRQRQEDIEPNLDYEVERHASLTGDSVRFNTEARRAWLAFATSPQATWRGNFRELSASVTR
Query Conservation   
  

  

    
 






 


  
    
             
  
   
 
   
    







   
  
Alig confidence 






























..........

















.......













Template Conservation          
                 
    ..........           
  
   .......  

 
  
  
  
Template Sequence  RIIDPLASQCSKFRFKALDASNAIDRLRFIS. . . . . . . . . . EQENVKCDDGVLERILDI. . . . . . . SAGDLRRGITLLQS
Template Known Secondary structure  GS
S




..........TTT



.......TSS
Template Predicted Secondary structure 










..........






.......



Template SS confidence 















































































   175....180.........190.........200..... ....210.........220... ......230.......
 
   422.... ...430.........440.
Predicted Secondary structure 
....





Query SS confidence 




. . . .














Query Sequence  MATFA. . . . TSGRITLDVVEDEIN
Query Conservation       ....    
    
     
Alig confidence 




....














Template Conservation 
   
        

   
 
  
Template Sequence  ASKGAQYLGDGKNITSTQVEELAG
Template Known Secondary structure  T
S




T
Template Predicted Secondary structure 







Template SS confidence 























   238.240.........250.........260.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions