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Job DescriptionP38035
Confidence98.87%DateThu Jan 5 11:57:48 GMT 2012
Rank79Aligned Residues214
% Identity14%Templated1sxja2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   187..190.........200... ......210.........220.........230.........240.........250.
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Query Sequence  ATRNPHFNRMIEQIEKV. . . . . . . . . . . . . . . AIKSRAPILLNGPTGAGKSFLARRILELKQARHQFSGAFVEVNCATLR
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Template Sequence  VCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQELGYD. . . . . . ILEQNASDVR
Template Known Secondary structure 

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TTTT



TTSTTS
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STTSSTT
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   310.........320.........330.........340.........350.........360.........370... ......380...
 
   252.......260.........270.........280.........290.........300.........310.........320.........330.
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Query Sequence  GDTAMSTLFGHVKGAFTGARESREGLLRSANGGMLFLDEIGELGADEQAMLLKAIEEKTFYPFGSDRQVSSDFQLIAGTV
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Template Sequence  SKTLLNAGVKNAL. DNMSVVGYFKHQNLNGKHFVIIMDEVDGMSGGDRGGVGQLAQFCR. . . . . . . . . . KTSTPLILICN
Template Known Secondary structure 
TGGGGT.T


STTTTT


SSTTS
SGGG

TTSTT..........
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S
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   384.....390...... ...400.........410.........420.........430.........440. ........450..
 
   332.......340.........350.........360.........370.........380.........390.........400.........410.
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Query Sequence  RDLRQLVAEGKFREDLYARINLWTFTLPGLRQRQEDIEPNLDYEVERHASLTGDSVRFNTEARRAWLAFATSPQATWRGN
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Template Sequence  E. . . . . . RNLPKMRPFDRVCLDIQFRRPDANSIKSRLMTIAIRE. . . . . . . . . . KFKLDPNVIDRLIQT. . . . . . . TRGD
Template Known Secondary structure 
......TTSSTTGGGTTTS




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   457 ..460.........470.........480.........490.... .....500......... 510...
 
   412.......420.........430.........440..
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Query Sequence  FRELSASVTRMATFATSGRITLDVVEDEINR
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Template Sequence  IRQVINLLSTISTT. . TKTINHENINEISKA
Template Known Secondary structure  T..SS


TT
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   514.....520....... ..530.........540..
 
Download:Text version

No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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