Return to main results Retrieve Phyre Job Id

Job DescriptionP38035
Confidence99.84%DateThu Jan 5 11:57:48 GMT 2012
Rank13Aligned Residues219
% Identity17%Templated1qvra3
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   186...190.........200.........210 .........220.........230.........240.........250.........
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Query Sequence  IATRNPHFNRMIEQIEKVAIKSRAP. . . . . . ILLNGPTGAGKSFLARRILELKQARHQFSGAFVEVNCATLRGDTAMSTL
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Template Sequence  VVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLF. . . DTEEAMIRIDMT. . . . . . . . . . .
Template Known Secondary structure  S
S
GGG
S
SSS
SBS
SSSS...SSGGG
TT...........
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   560.........570.........580.........590.........600.........610... ......620.....
 
   260.........270.........280.........290.........300.........310.........320.........330...
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Query Sequence  FGHVKGAFTGARESREGLLRSANGGMLFLDEIGELGADEQAMLLKAIEEKTFYPFGSDRQVSSDFQLIAGTVRD. . . . . .
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Template Sequence  . . EYMEKHAVSRLQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSHGRTVDFRNTVIILTSNLGSPLILE
Template Known Secondary structure  ..T

SSGGGGG


SSSSGGGS
TTT

SSS


TT

TT
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   626...630.........640.........650.........660.........670.........680.........690.........700...
 
   334.....340.........350.........360.........370.........380.........390.........400
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Query Sequence  . . . . . . . . . . . . . LRQLVAEGKFREDLYARINLWTFTLPGLRQRQEDIEPNLDYEVERHASLTGDSVRFNTEARRAWLAF
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Template Sequence  GLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQIRQIVEIQLSYLRARLAEKRISLELTEAAKDFLAE.
Template Known Secondary structure  TT

TTS
T
SB

B




TTT

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   718.720.........730.........740.........750.........760.........770.........780.........790......
 
   401........410.........420....
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Query Sequence  ATSPQATWRGNFRELSASVTRMAT
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Template Sequence  . . . RGYDPVFGARPLRRVIQRELE
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BTTTBTSTT
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   797..800.........810.......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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