Return to main results Retrieve Phyre Job Id

Job DescriptionP38035
Confidence99.35%DateThu Jan 5 11:57:48 GMT 2012
Rank42Aligned Residues287
% Identity14%Templated1qvra2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   183......190.........200.........210.........220.........230.........240.........250.........260..
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Query Sequence  KSGIATRNPHFNRMIEQIEKVAIKSRAPILLNGPTGAGKSFLARRILELKQARHQFSGAFVEVNCATLRGDTAMSTLFGH
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Template Sequence  LDPVIGRDEEIRRVIQILLR. . . RTKNNPVLIGEPGVGKTAIVEGLAQ. . . . . . . . . . . . . RIVKGDVPEGLKGKRIVSL
Template Known Secondary structure  S



S

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   169170.........180........ .190.........200.........210... ......220.........230..
 
   263......270.........280.........290.........300.........310.........320.........330.........340..
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Query Sequence  VKGAFTGARESREGLLRSANGGMLFLDEIGELGADEQAMLLKAIEEKTFYPFGSDRQVSSDFQLIAGTVRDLRQLVAEGK
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Template Sequence  QMEFEERLKAVIQEVVQSQGEVILFIDELKPALARGE. . . . . . . . . . . . . . . . . . . . . . . . LRLIGATTLDEYREI. . . E
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   233......240.........250.........260......... 270.........280.... .
 
   343......350.........360.........370.........380.........390....... ..400.........410 .........
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Query Sequence  FREDLYARINLWTFTLPGLRQRQEDIEPNLDYEVERHASLTGDSVRFNTEARRAW. . LAFATSPQATWRG. NFRELSASV
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Template Sequence  KDPALERRFQPVYVDEPTVEETISILRGLKEKYEVHH. . . . . . GVRISDSAIIAAATLSHRYITERRLPDKAIDLIDEAA
Template Known Secondary structure  T
TTT
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   316...320.........330.........340.........350.. .......360.........370.........380.........
 
   420.........430.........440.........450.........460.........470 .........480
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Query Sequence  TRMATFATSGRITLDVVEDEINRLRYNWQESRPSALTALLGAEAENIDLFD. . . . . . . . . . . . . . . . . . . RMQLEHVIAI
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Template Sequence  ARLRMALESAPEEIDALERKKLQLEIEREALKKEKDPDSQERLKAIEAEIAKLTEEIAKLRAEWEREREILRKLREAQHR
Template Known Secondary structure  TTTTSS
SSS
T
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   390.........400.........410.........420.........430.........440.........450.........460.........
 
   481........490.........500.........510........
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Query Sequence  CRQAKSLSAAGRQLFDVSRQGKASVNDADRLRKYLARF
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Template Sequence  LDEVRREIELAERQYDLNRAAELRYGELPKLEAEVEAL
Template Known Secondary structure  TTTT
TT
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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