Return to main results Retrieve Phyre Job Id

Job DescriptionP38035
Confidence99.55%DateThu Jan 5 11:57:48 GMT 2012
Rank35Aligned Residues225
% Identity18%Templated1ixsb2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution3.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   180.........190.........200.........210 .........220.........230.........240.........250.......
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Query Sequence  DFLKSGIATRNPHFNRMIEQIEKVAIKSRAP. . ILLNGPTGAGKSFLARRILELKQARHQFSGAFVEVNCATLRGDTAMS
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Template Sequence  PKTLDEYIGQERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVIAHEL. . . . . . GVNLRVTSGPAIEKPGDLA
Template Known Secondary structure 

SGGGS
S
TTSSS





TTS
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TTT

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   8.10.........20.........30.........40.........50.........60.. .......70.........80.
 
   258.260.........270.........280.........290.........300.........310.........320.........330.......
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Query Sequence  TLFGHVKGAFTGARESREGLLRSANGGMLFLDEIGELGADEQAMLLKAIEEKTFYPFGSDRQVSSDFQLIAGTVRDLRQL
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Template Sequence  AILA. . . . . . . . . . . . . . . . NSLEEGDILFIDEIHRLSRQAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTLIGAT
Template Known Secondary structure  ................TT

TT
TGGG

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   82... ....90.........100.........110.........120.........130.........140.....
 
   338.340.........350.........360.........370.........380.........390.........400.........410.......
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Query Sequence  VAEGKFREDLYARINLWTFTLPGLRQRQEDIEPNLDYEVERHASLTGDSVRFNTEARRAWLAFATSPQATWRGNFRELSA
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Template Sequence  TRPGLITAPLLSRFGIVEHLEYY. . . TPEELAQGVMRDARLL. . . . . . GVRITEEAALEIGRR. . . . . . . SRGTMRVAKR
Template Known Secondary structure  S

SS
S
GGGGG
S



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   146...150.........160........ .170.........180.... .....190......... 200.........
 
   418.420....... ..430.........440..
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Query Sequence  SVTRMATFAT. . . SGRITLDVVEDEINR
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Template Sequence  LFRRVRDFAQVAGEEVITRERALEALAA
Template Known Secondary structure  TTS

S
B
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   210.........220.........230.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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