Return to main results Retrieve Phyre Job Id

Job DescriptionP38035
Confidence99.20%DateThu Jan 5 11:57:48 GMT 2012
Rank53Aligned Residues204
% Identity19%Templated1iqpa2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   183......190.........200.........210.........220.........230.........240.........250.........260..
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Query Sequence  KSGIATRNPHFNRMIEQIEKVAIKSRAPILLNGPTGAGKSFLARRILELKQARHQFSGAFVEVNCATLRGDTAMSTLFGH
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Template Sequence  LDDIVGQEHIVKRLKHYVKT. . . GSMPHLLFAGPPGVGKTTAALALARELFGENWR. . . HNFLELNASDERGINVIREKV
Template Known Secondary structure  TTT

S
...T


S
TTSSGGG...TT
TT
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   24.....30.........40... ......50.........60.........70...... ...80.........90.......
 
   263......270.........280.........290.........300.........310.........320.........330.........340..
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Query Sequence  VKGAFTGARESREGLLRSANGGMLFLDEIGELGADEQAMLLKAIEEKTFYPFGSDRQVSSDFQLIAGTVRDLRQLVAEGK
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Template Sequence  KEFARTKPIGGASFK. . . . . . . IIFLDEADALTQDAQQALRRTMEMFS. . . . . . . . . . . SNVRFILSCNY. . . . . . . SSK
Template Known Secondary structure  S

GGG
S
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TT...........TTS
.......GGG
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   98.100.........110.. .......120.........130........ .140......... 150..
 
   343......350.........360.........370.........380.........390.........400.........410.........420..
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Query Sequence  FREDLYARINLWTFTLPGLRQRQEDIEPNLDYEVERHASLTGDSVRFNTEARRAWLAFATSPQATWRGNFRELSASVTRM
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Template Sequence  IIEPIQSRCAIFRFRPLRDEDIAKRLRYIAEN. . . . . . . . . . EGLELTEEGLQAILYI. . . . . . . AEGDMRRAINILQAA
Template Known Secondary structure  S
T




T..........TT

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   153......160.........170.........180.... .....190.........200 .........210.....
 
   423......430......
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Query Sequence  ATFATSGRITLDVV
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Template Sequence  AAL. . DKKITDENV
Template Known Secondary structure  TT..
S
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Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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