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Job DescriptionP38035
Confidence93.28%DateThu Jan 5 11:57:48 GMT 2012
Rank256Aligned Residues96
% Identity17%Templatec3kx2A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:pre-mrna-splicing factor atp-dependent rna PDBTitle: crystal structure of prp43p in complex with adp
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   211........220... ......230.........240.........250....... ..260.........270.........280.
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Query Sequence  ILLNGPTGAGKSF. LARRILELKQARHQFSGAFVEVNCATLRGDTAMS. . TLFGHVKGAFTGARESREGLLRSA. . . . . .
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Template Sequence  MVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYM
Template Known Secondary structure 

TTSS
GGGGT
S
TT

BTTTTT

TT

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   112.......120.........130.........140.........150.........160.........170.........180.........190.
 
   282.......290.........300.......
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Query Sequence  . . . . . . . . . . . . . . . . NGGMLFLDEIGELGADEQAMLLKAIE
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Template Sequence  TDGMLLREAMEDHDLSRYSCIILDEAHERTLA. TDILMGLLK
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GGG

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   192.......200.........210.........220... ......230..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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