Job Description P38035 Confidence 99.21% Date Thu Jan 5 11:57:48 GMT 2012 Rank 52 Aligned Residues 207 % Identity 22% Template c3hu2C_ PDB info PDB header:transport protein Chain: C: PDB Molecule:transitional endoplasmic reticulum atpase; PDBTitle: structure of p97 n-d1 r86a mutant in complex with atpgs Resolution 2.85 Å

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		187	.	.	190	.	.	.	.	.	.	.	.	.	200												.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.
Query Sequence		A	T	R	N	P	H	F	N	R	M	I	E	Q	I	.	.	.	.	.	.	.	.	.	.	.	E	K	V	A	I	K	S	R	A	P	I	L	L	N	G	P	T	G	A	G	K	S	F	L	A	R	R	I	L	E	L	K	Q	A	R	H	Q	F	S	G	A	F	V	E	V	N	C	A	T	L	.	.	.	.	.
Query Conservation																.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.										.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.
Template Sequence		I	G	G	C	R	K	Q	L	A	Q	I	K	E	M	V	E	L	P	L	R	H	P	A	L	F	K	A	I	G	V	K	P	P	R	G	I	L	L	Y	G	P	P	G	T	G	K	T	L	I	A	R	A	V	A	N	E	T	G	A	F	.	.	.	.	.	.	F	F	L	I	N	G	P	E	I	M	S	K	L	A
Template Known Secondary structure				S												T														T												S	T	T	S	S													S	S		.	.	.	.	.	.											T	S		T
Template Predicted Secondary structure																																																														.	.	.	.	.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.							.	.	.	.	270	.	.	.	.	.	.	.	.	.
			251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.												.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																																																.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																																																.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	R	G	D	T	A	M	S	T	L	F	G	H	V	K	G	A	F	T	G	A	R	E	S	R	E	G	L	L	R	S	A	N	G	G	M	L	F	L	D	E	I	G	E	L	G	A	D	.	.	.	.	.	.	.	.	.	.	.	E	Q	A	M	L	L	K	A	I	E	E	K	T	F	Y	P	F	G	S	D	R
Query Conservation		.																																																.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.
Template Sequence		G	E	S	E	S	N	L	R	K	A	F	E	E	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	N	A	P	A	I	I	F	I	D	E	L	D	A	I	A	P	K	R	E	K	T	H	G	E	V	E	R	R	I	V	S	Q	L	L	T	L	M	D	G	.	.	.	.	.	.	.	.	.	L
Template Known Secondary structure		T															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S							S	G	G	G	T		B		S	S	S																				.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.																.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.										.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.			.	350	.	.		.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure																																.	.					.
Query SS confidence																																.	.					.
Query Sequence		Q	V	S	S	D	F	Q	L	I	A	G	T	V	R	D	L	R	Q	L	V	A	E	G	K	F	R	E	D	L	Y	.	.	A	R	I	N	.	L	W	T	F	T	L	P	G	L	R	Q	R	Q	E	D	I	E	P	N	L	D	Y	E	V	E	R	H	A	S	L	T	G	D	S	V	R	F	N	T	E	A	R	R
Query Conservation																																.	.					.
Alig confidence																.	.	.	.	.	.	.										.	.					.													.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Template Sequence		K	Q	R	A	H	V	I	V	M	A	A	T	N	R	.	.	.	.	.	.	.	P	N	S	I	D	P	A	L	R	R	F	G	R	F	D	R	E	V	D	I	G	I	P	D	A	T	G	R	.	.	.	.	.	.	.	.	L	E	I	L	Q	I	H	T	K	N	M	K	L	A	D	D	V	D	L	E	Q	V	A
Template Known Secondary structure			G	G	G									S		.	.	.	.	.	.	.	G	G	G	B		G	G	G	G	S	T	T	S	S															.	.	.	.	.	.	.	.								S	T	T	S		B		T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.								350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.									.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.																					.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	W	L	A	F	A	T	S	P	Q	A	T	W	R	G	N	F	R	E	L	S	A	S	V	T	R	M	A	T	F	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	G	R	I	T	L	D	V	V	E	D	E	I	N	R	L	R	Y	N	W
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.							.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.							.	.
Template Sequence		N	E	.	.	.	.	.	.	.	T	H	G	H	V	G	.	.	A	D	L	A	A	L	C	S	E	A	A	L	Q	A	I	R	K	K	M	D	L	I	D	L	E	D	E	T	I	D	A	E	V	M	N	S	L	A	V	T	M	D	D	F	R	W	A	L	S	Q	S	N	P	S	A
Template Known Secondary structure				.	.	.	.	.	.	.		T	T				.	.																		T	T	T	S			T	T	S	S	S											B
Template Predicted Secondary structure				.	.	.	.	.	.	.							.	.
Template SS confidence
		401	.								.	.	.	.	.	.			.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions