Job Description P38035 Confidence 99.66% Date Thu Jan 5 11:57:48 GMT 2012 Rank 25 Aligned Residues 241 % Identity 20% Template c3hteC_ PDB info PDB header:motor protein Chain: C: PDB Molecule:atp-dependent clp protease atp-binding subunit clpx; PDBTitle: crystal structure of nucleotide-free hexameric clpx Resolution 4.03 Å

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		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.				.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.
Query SS confidence																																.	.	.
Query Sequence		E	E	R	Q	Q	T	L	D	F	L	K	S	G	I	A	T	R	N	P	H	F	N	R	M	I	E	Q	I	E	K	.	.	.	V	A	I	K	S	R	A	P	I	L	L	N	G	P	T	G	A	G	K	S	F	L	A	R	R	I	L	E	L	K	Q	A	R	H	Q	F	S	G	A	F	V	E	V	N	C	A	T
Query Conservation																																.	.	.
Alig confidence																																.	.	.																																		.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.
Template Sequence		P	T	P	H	E	I	R	N	H	L	D	D	Y	V	I	G	Q	E	Q	A	K	K	V	L	A	V	A	V	Y	N	H	Y	K	R	L	R	N	G	K	S	N	I	L	L	I	G	P	T	G	S	G	K	T	L	L	A	E	T	L	A	R	L	L	D	V	P	.	.	.	.	.	.	F	T	M	A	D	A	T	T
Template Known Secondary structure													T	T	S		S																																T	T	S	S											T	T	T			.	.	.	.	.	.						G	G	G
Template Predicted Secondary structure																																																																				.	.	.	.	.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130							.	.	.	.	.	.	.	.
		250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.			.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.										.	.	.	.
Predicted Secondary structure					.																																											.	.																				.	.	.	.	.	.	.	.	.
Query SS confidence					.																																											.	.																				.	.	.	.	.	.	.	.	.
Query Sequence		L	R	G	.	D	T	A	M	S	T	L	F	G	H	V	K	G	A	F	T	G	A	R	E	S	R	E	G	L	L	R	S	A	N	G	G	M	L	F	L	D	E	I	G	E	L	.	.	G	A	D	E	Q	A	M	L	L	K	A	I	E	E	K	T	F	Y	P	.	.	.	.	.	.	.	.	.	F	G	S	D
Query Conservation					.																																											.	.																				.	.	.	.	.	.	.	.	.
Alig confidence					.													.	.	.	.	.	.	.	.	.	.	.																				.	.																				.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	D	V	E	N	I	I	Q	K	L	L	Q	K	C	D	.	.	.	.	.	.	.	.	.	.	.	Y	D	V	Q	K	A	Q	R	G	I	V	Y	I	D	Q	I	D	K	I	S	R	G	E	G	V	Q	Q	A	L	L	K	L	I	E	G	V	D	T	S	K	I	L	F	I	C	G	G	A	F	A	G	L	D
Template Known Secondary structure				T	T	T									T	T	T	.	.	.	.	.	.	.	.	.	.	.	T							T								G	G	G	G																			T	T	S	S									T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.												.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370					.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure																																																							.	.	.	.
Query SS confidence																																																							.	.	.	.
Query Sequence		R	Q	V	S	S	D	F	Q	L	I	A	G	T	V	R	D	L	R	Q	L	V	A	E	G	K	F	R	E	D	L	Y	A	R	I	N	L	W	T	F	T	L	P	G	L	R	Q	R	Q	E	D	I	E	P	.	.	.	.	N	L	D	Y	E	V	E	R	H	A	S	L	T	G	D	S	V	R	F	N	T	E	A
Query Conservation																																																							.	.	.	.
Alig confidence																																																							.	.	.	.
Template Conservation
Template Sequence		K	V	I	S	H	R	V	S	E	G	E	L	L	A	Q	V	E	P	E	D	L	I	K	F	G	L	I	P	E	F	I	G	R	L	P	V	V	A	T	L	N	E	L	S	E	E	A	L	I	Q	I	L	K	E	P	K	N	A	L	T	K	Q	Y	Q	A	L	F	N	L	E	G	V	D	L	E	F	R	D	E	A
Template Known Secondary structure																T										T							T	T									S												S	S	T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.			.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
Predicted Secondary structure																				.	.
Query SS confidence																				.	.
Query Sequence		R	R	A	W	L	A	F	A	T	S	P	Q	A	T	W	R	G	N	.	.	F	R	E	L	S	A	S	V	T	R	M	A	T	F	A	T	S	G	R	I	T	L	D	V	V
Query Conservation																				.	.
Alig confidence										.	.	.	.	.	.					.	.
Template Conservation										.	.	.	.	.	.
Template Sequence		L	D	A	I	A	K	K	A	.	.	.	.	.	.	M	A	R	K	T	G	A	R	G	L	R	S	I	V	E	A	A	L	L	D	T	M	Y	D	L	P	S	M	E	D	V
Template Known Secondary structure										.	.	.	.	.	.			T	T		T	T																	S	S	T	T	S			S
Template Predicted Secondary structure										.	.	.	.	.	.
Template SS confidence
		355	.	.	.	.	360	.	.							.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions