Job Description P38035 Confidence 99.12% Date Thu Jan 5 11:57:48 GMT 2012 Rank 62 Aligned Residues 215 % Identity 21% Template c3h4mC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:proteasome-activating nucleotidase; PDBTitle: aaa atpase domain of the proteasome- activating nucleotidase Resolution 3.11 Å

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		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200											.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.
Query Sequence		L	K	S	G	I	A	T	R	N	P	H	F	N	R	M	I	E	Q	I	.	.	.	.	.	.	.	.	.	.	E	K	V	A	I	K	S	R	A	P	I	L	L	N	G	P	T	G	A	G	K	S	F	L	A	R	R	I	L	E	L	K	Q	A	R	H	Q	F	S	G	A	F	V	E	V	N	C	A	T	L	R
Query Conservation																					.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.
Template Sequence		R	Y	E	D	I	G	G	L	E	K	Q	M	Q	E	I	R	E	V	V	E	L	P	L	K	H	P	E	L	F	E	K	V	G	I	E	P	P	K	G	I	L	L	Y	G	P	P	G	T	G	K	T	L	L	A	K	A	V	A	T	E	T	.	.	.	.	.	.	N	A	T	F	I	R	V	V	G	S	E	L	V
Template Known Secondary structure			G	G	G			S										T	T	T	T													T					S						S	S	S	S	S	S												T	.	.	.	.	.	.	T								G	G	G	S
Template Predicted Secondary structure																																																															.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.							.	230	.	.	.	.	.	.	.	.	.	240	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.												.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	D	T	A	M	S	T	L	F	G	H	V	K	G	A	F	T	G	A	R	E	S	R	E	G	L	L	R	S	A	N	G	G	M	L	F	L	D	E	I	G	E	L	.	.	.	.	.	.	.	.	.	.	.	G	A	D	E	Q	A	M	L	L	K	A	I	E	E	K	T	F	Y	P	F	G	S	D	R	Q	V
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.																																																												.	.	.	.	.	.
Template Sequence		K	.	.	.	.	.	.	.	.	.	K	F	I	G	E	G	A	S	L	V	K	D	I	F	K	L	A	K	E	K	A	P	S	I	I	F	I	D	E	I	D	A	I	A	A	K	R	T	D	A	L	T	G	G	D	R	E	V	Q	R	T	L	M	Q	L	L	A	E	M	.	.	.	.	.	.	D	G	F	D	A
Template Known Secondary structure			.	.	.	.	.	.	.	.	.		S	T	T	T	T	T													T		S								G	G	G	T	S	B			S	S	S				S	T														T	.	.	.	.	.	.	T	S	S		S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.																																																												.	.	.	.	.	.
Template SS confidence
		242										.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.							.	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350				.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.
Query SS confidence																																.	.	.
Query Sequence		S	S	D	F	Q	L	I	A	G	T	V	R	D	L	R	Q	L	V	A	E	G	K	F	R	E	D	L	Y	A	R	.	.	.	I	N	L	W	T	F	T	L	P	G	L	R	Q	R	Q	E	D	I	E	P	N	L	D	Y	E	V	E	R	H	A	S	L	T	G	D	S	V	R	F	N	T	E	A	R	R	A	W
Query Conservation																																.	.	.
Alig confidence														.	.	.	.	.	.	.												.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	G	D	V	K	I	I	G	A	T	N	R	.	.	.	.	.	.	.	P	D	I	L	D	P	A	I	L	R	P	G	R	F	D	R	I	I	E	V	P	A	P	D	E	K	G	R	L	E	I	L	K	I	H	T	R	K	.	.	.	.	.	.	.	.	.	.	.	M	N	L	A	E	D	V	N	L	E	E	I
Template Known Secondary structure		S	S	S								S	S	.	.	.	.	.	.	.	G	G	G	B						S	T	T	S																						T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	S		B		S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.								.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.												.	.	.	360	.	.	.	.	.	.	.	.
		398	.	400	.	.	.	.	.	.	.	.	.	410		.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.				.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
Predicted Secondary structure															.																	.	.	.
Query SS confidence															.																	.	.	.
Query Sequence		L	A	F	A	T	S	P	Q	A	T	W	R	G	.	N	F	R	E	L	S	A	S	V	T	R	M	A	T	F	A	.	.	.	T	S	G	R	I	T	L	D	V	V	E	D	E	I	N	R
Query Conservation															.																	.	.	.
Alig confidence					.	.	.	.	.	.	.				.																	.	.	.
Template Conservation					.	.	.	.	.	.	.
Template Sequence		A	K	M	.	.	.	.	.	.	.	T	E	G	C	V	G	A	E	L	K	A	I	C	T	E	A	G	M	N	A	I	R	E	L	R	D	Y	V	T	M	D	D	F	R	K	A	V	E	K
Template Known Secondary structure			T	T	.	.	.	.	.	.	.	S	T	T																				T	T		S	S	B
Template Predicted Secondary structure					.	.	.	.	.	.	.
Template SS confidence
		369	370	.								.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions