Job Description P38035 Confidence 99.65% Date Thu Jan 5 11:57:48 GMT 2012 Rank 27 Aligned Residues 223 % Identity 20% Template c3f9vA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:minichromosome maintenance protein mcm; PDBTitle: crystal structure of a near full-length archaeal mcm: functional2 insights for an aaa+ hexameric helicase Resolution 4.35 Å

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		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	R	A	P	I	L	L	N	G	P	T	G	A	G	K	S	F	L	A	R	R	I	L	E	L	K	Q	A	R	H	Q	F	S	G	A	F	V	E	V	N	C	A	T	L	R	G	D	T	A	M	S	T	L	F	G	H	V	K	G	A	F	T	G	A	R	E	S	R	E	G	L	L	R	S	A	N	G	G	M
Query Conservation
Alig confidence																																.	.	.	.	.	.																	.	.	.	.
Template Conservation																																.	.	.	.	.	.																	.	.	.	.
Template Sequence		R	G	D	I	H	I	L	I	I	G	D	P	G	T	A	K	S	Q	M	L	Q	F	I	S	R	V	A	P	R	A	.	.	.	.	.	.	V	Y	T	T	G	K	G	S	T	A	A	G	L	T	A	A	.	.	.	.	V	V	R	E	K	G	T	G	E	Y	Y	L	E	A	G	A	L	V	L	A	D	G	G	I
Template Known Secondary structure				S								S	S			T							S	S	S	T	T		S			.	.	.	.	.	.					T	T		S	T	T	T	T	S				.	.	.	.		S	S	G	G	G	T	S	S		S										S	S	S
Template Predicted Secondary structure																																.	.	.	.	.	.																	.	.	.	.
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360							.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.					.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.			.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.							.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.																				.	.	.	.	.	.
Query SS confidence																													.	.																				.	.	.	.	.	.
Query Sequence		L	F	L	D	E	I	G	E	L	G	A	D	E	Q	A	M	L	L	K	A	I	E	E	K	T	F	Y	.	.	P	F	G	S	D	R	Q	V	S	S	D	F	Q	L	I	A	G	T	V	.	.	.	.	.	.	R	D	L	R	Q	L	V	A	E	G	K	F	R	E	D	L	Y	A	R	I	N	L	W	T	F	T
Query Conservation																													.	.																				.	.	.	.	.	.
Alig confidence																													.	.																				.	.	.	.	.	.
Template Conservation
Template Sequence		A	V	I	D	E	I	D	K	M	R	D	E	D	R	V	A	I	H	E	A	M	E	Q	Q	T	V	S	I	A	K	A	G	I	V	A	K	L	N	A	R	A	A	V	I	A	A	G	N	P	K	F	G	R	Y	I	S	E	R	P	V	S	D	N	I	N	L	P	P	T	I	L	S	R	F	D	L	I	F	I	L
Template Known Secondary structure					T	T	T	T				S												S	S	S					S	S	S	S																	T	T			S		T	T	S		S		T	T	T		S		S	S	S	G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.																			.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.									.	.	.	.	.	.	410	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.
Query Sequence		L	P	G	L	R	Q	R	Q	E	D	I	E	P	N	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	E	V	E	R	H	A	S	L	T	G	D	S	V	R	F	N	T	E	A	R	R	A	W	L	A	F	A	T	S	.	.	.	.	.	.	.	.	P	Q	A	T	W	R	G	N
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.																			.	.	.	.	.	.	.	.
Template Conservation																																														.	.
Template Sequence		K	D	Q	P	G	E	Q	D	R	E	L	A	N	Y	I	L	D	V	H	S	G	K	S	T	K	N	I	I	D	I	D	T	L	R	K	Y	I	A	Y	A	R	K	Y	V	.	.	T	P	K	I	T	S	E	A	K	N	L	I	T	D	F	F	V	E	M	R	K	K	S	S	E	T	P	D	S	P	I	L	I	T
Template Known Secondary structure				T	T													T	T	T				S	S	S	S	T	T			T	T	T												.	.								T									T	T	S	S		S			B		S	S	S		B		S	S
Template Predicted Secondary structure																																														.	.
Template SS confidence
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.			.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.				.	.	.	430	.	.	.	.	.	.	.	.	.	440
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		F	R	E	L	S	A	S	V	T	R	M	A	T	F	A	.	.	.	T	S	G	R	I	T	L	D	V	V	E	D	E	I
Query Conservation																	.	.	.
Alig confidence																	.	.	.
Template Conservation
Template Sequence		P	R	Q	L	E	A	L	I	R	I	S	E	A	Y	A	K	M	A	L	K	A	E	V	T	R	E	D	A	E	R	A	I
Template Known Secondary structure		T	T	T	T	T												T	T	S	S			S	S
Template Predicted Secondary structure
Template SS confidence
		559	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions