Job Description P38035 Confidence 99.25% Date Thu Jan 5 11:57:48 GMT 2012 Rank 48 Aligned Residues 209 % Identity 23% Template c3b9pA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:cg5977-pa, isoform a; PDBTitle: spastin Resolution 2.70 Å

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		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.											.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.
Query Sequence		A	T	R	N	P	H	F	N	R	M	I	E	Q	I	E	K	V	.	.	.	.	.	.	.	.	.	.	A	I	K	S	R	A	P	I	L	L	N	G	P	T	G	A	G	K	S	F	L	A	R	R	I	L	E	L	K	Q	A	R	H	Q	F	S	G	A	F	V	E	V	N	C	A	T	L	R	G	D	T	A	M
Query Conservation																			.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.															.	.	.	.
Template Conservation																																																										.	.	.	.	.	.															.	.	.	.
Template Sequence		I	A	G	Q	D	V	A	K	Q	A	L	Q	E	M	V	I	L	P	S	V	R	P	E	L	F	T	G	L	R	A	P	A	K	G	L	L	L	F	G	P	P	G	N	G	K	T	L	L	A	R	A	V	A	T	E	C	.	.	.	.	.	.	S	A	T	F	L	N	I	S	A	A	S	L	T	S	.	.	.	.
Template Known Secondary structure		S														T							G	G	G	S		G	G	G				S						S	S	S	S	S													T	.	.	.	.	.	.	T								S	T	T	T	S	S	.	.	.	.
Template Predicted Secondary structure																																																										.	.	.	.	.	.															.	.	.	.
Template SS confidence
		485	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540							.	.	.	.	.	.	.	.	.	550	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.							.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure																																								.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.
Query Sequence		S	T	L	F	G	H	V	K	G	A	F	T	G	A	R	E	S	R	E	G	L	L	R	S	A	N	G	G	M	L	F	L	D	E	I	G	E	L	.	.	.	.	.	.	G	A	D	E	Q	A	M	L	L	K	A	I	E	E	K	T	F	Y	P	F	G	S	D	R	Q	V	S	S	D	F	Q	L	I	A	G	T
Query Conservation																																								.	.	.	.	.	.
Alig confidence		.	.	.	.	.																																		.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	K	Y	V	G	D	G	E	K	L	V	R	A	L	F	A	V	A	R	H	M	Q	P	S	I	I	F	I	D	E	V	D	S	L	L	S	E	R	E	A	S	R	R	L	K	T	E	F	L	V	E	F	D	G	L	P	.	.	.	.	.	.	.	.	.	.	.	.	R	I	V	V	L	A	A	T
Template Known Secondary structure		.	.	.	.	.	S	S		S																T		S							T	G	G	G	T	S	B					S																.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
							555	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.													610	.	.	.	.	.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.		.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		V	R	D	L	R	Q	L	V	A	E	G	K	F	R	E	D	L	Y	A	R	I	N	L	.	W	T	F	T	L	P	G	L	R	Q	R	Q	E	D	I	E	P	N	L	D	Y	E	V	E	R	H	A	S	L	T	G	D	S	V	R	F	N	T	E	A	R	R	A	W	L	A	F	A	T	S	P	Q	A	T	W	R
Query Conservation																									.
Alig confidence				.	.	.	.	.	.	.															.																				.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Template Sequence		N	R	.	.	.	.	.	.	.	P	Q	E	L	D	E	A	A	L	R	R	F	T	K	R	V	Y	V	S	L	P	D	E	Q	T	R	E	L	L	L	N	R	L	L	.	.	.	.	.	.	.	.	.	.	Q	K	Q	G	S	P	L	D	T	E	A	L	R	R	L	A	K	I	.	.	.	.	.	.	.	T	D
Template Known Secondary structure		S		.	.	.	.	.	.	.	G	G	G	B																															.	.	.	.	.	.	.	.	.	.	G	G	G	S			S												.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.
Template SS confidence
		629	630								.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.											.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.								.	.
		410		.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.								.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure			.																	.	.	.	.	.	.	.
Query SS confidence			.																	.	.	.	.	.	.	.
Query Sequence		G	.	N	F	R	E	L	S	A	S	V	T	R	M	A	T	F	A	.	.	.	.	.	.	.	T	S	G	R	I	T	L	D	V	V	E	D	E	I	N	R	L	R	Y	N
Query Conservation			.																	.	.	.	.	.	.	.
Alig confidence			.																	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	Y	S	G	S	D	L	T	A	L	A	K	D	A	A	L	E	P	I	R	E	L	N	I	S	A	M	R	A	I	T	E	Q	D	F	H	S	S	L	K	R	I	R	R	S
Template Known Secondary structure		T														T	T					T																		T	T	S				S
Template Predicted Secondary structure
Template SS confidence
		685	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions