Job Description P38035 Confidence 92.40% Date Thu Jan 5 11:57:48 GMT 2012 Rank 285 Aligned Residues 100 % Identity 21% Template c2z83A_ PDB info PDB header:viral protein Chain: A: PDB Molecule:helicase/nucleoside triphosphatase; PDBTitle: crystal structure of catalytic domain of japanese2 encephalitis virus ns3 helicase/nucleoside triphosphatase3 at a resolution 1.8 Resolution 1.80 Å

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		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.				.	.	.	.	.	.
Predicted Secondary structure																					.	.																																																			.	.	.
Query SS confidence																					.	.																																																			.	.	.
Query Sequence		A	I	K	S	R	A	P	I	L	L	N	G	P	T	G	A	G	K	S	.	.	F	L	A	R	R	I	L	E	L	K	Q	A	R	H	Q	F	S	G	A	F	V	E	V	N	C	A	T	L	R	G	D	T	A	M	S	T	L	F	G	H	V	K	G	A	F	T	G	A	R	E	.	.	.	S	R	E	G	L	L
Query Conservation																					.	.																																																			.	.	.
Alig confidence																					.	.																	.	.	.																.																.	.	.
Template Conservation																																							.	.	.																.
Template Sequence		M	L	R	K	R	Q	M	T	V	L	D	L	H	P	G	S	G	K	T	R	K	I	L	P	Q	I	I	K	D	A	I	Q	Q	R	L	R	T	.	.	.	A	V	L	A	P	T	R	V	V	A	A	E	M	A	E	.	A	L	R	G	L	P	V	R	Y	Q	T	G	N	E	I	V	D	V	M	C	H	A	T	L
Template Known Secondary structure		G	G	S	T	T									T	T	S		T	T	T	T												T	T				.	.	.						S										.		T	T	T	S										S
Template Predicted Secondary structure																																							.	.	.																.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.				220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		279								280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.
Query Sequence		R	.	.	.	.	.	.	.	S	A	N	G	G	M	L	F	L	D	E	I	G	E	L	G	A	D	E	Q	A	M	L	L	K	A	I	E
Query Conservation			.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	H	R	L	M	S	P	N	V	P	N	Y	N	L	F	V	M	D	E	A	H	F	T	D	P	A	S	I	A	A	R	G	Y	I	A	T
Template Known Secondary structure							S							S					S	S	T	T			S
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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