Job Description P38035 Confidence 95.56% Date Thu Jan 5 11:57:48 GMT 2012 Rank 133 Aligned Residues 134 % Identity 15% Template c2v9pH_ PDB info PDB header:hydrolase Chain: H: PDB Molecule:replication protein e1; PDBTitle: crystal structure of papillomavirus e1 hexameric helicase2 dna-free form Resolution 3.00 Å

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		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.			.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.
Query SS confidence																																																												.	.
Query Sequence		P	H	F	N	R	M	I	E	Q	I	E	K	V	A	I	K	S	R	A	P	I	L	L	N	G	P	T	G	A	G	K	S	F	L	A	R	R	I	L	E	L	K	Q	A	R	H	Q	F	S	G	A	F	V	E	V	N	C	A	.	.	T	L	R	G	D	T	A	M	S	T	L	F	G	H	V	K	G	A	F	T
Query Conservation																																																												.	.
Alig confidence																		.																													.	.	.	.	.	.								.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.																													.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	T	F	I	N	A	L	K	L	W	L	K	G	I	P	K	.	K	N	C	L	A	F	I	G	P	P	N	T	G	K	S	M	L	C	N	S	L	I	H	F	L	G	G	S	.	.	.	.	.	.	V	L	S	F	A	N	H	K	S	H	F	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														T		T	T	.		S							S	S	S	S	S													T			.	.	.	.	.	.				G	G	G	T	T	S	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.																													.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.		.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.							.	.	.	.	.	.	460	.	.	.	.	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.				.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.
Query SS confidence																																																											.	.	.
Query Sequence		G	A	R	E	S	R	E	G	L	L	R	S	A	N	G	G	M	L	F	L	D	E	I	G	E	L	G	A	D	E	Q	A	M	L	L	K	A	I	E	E	K	T	F	Y	P	F	G	S	D	R	Q	V	S	S	D	F	Q	.	.	.	L	I	A	G	T	V	R	D	L	R	Q	L	V	A	E	G	K	F	R	E
Query Conservation																																																											.	.	.
Alig confidence		.	.	.	.	.	.	.	.																																																		.	.	.																.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																																																																				.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	L	A	S	L	A	D	T	R	A	A	L	V	D	D	A	T	H	A	C	W	R	Y	F	D	T	Y	L	R	N	A	L	D	G	Y	P	V	S	I	D	R	K	H	K	A	A	V	Q	I	K	A	P	P	L	L	V	T	S	N	I	D	V	Q	A	E	D	R	Y	.	.	.	.	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	T	G	G	G	G	T		S						S																		T	T								S	S	S															S	S		G	G	G		G	G	G	.	.	.	.	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																																																				.	.	.	.
Template SS confidence
										466	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.					.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	Y	A	R	I	N	L	W	T	F	T	L	P	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	L	H	S	R	V	Q	T	F	R	F	E	Q	P	C
Template Known Secondary structure		G	G	T	T	T								S
Template Predicted Secondary structure
Template SS confidence
		534	.	.	.	.	.	540	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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