Job Description P38035 Confidence 99.09% Date Thu Jan 5 11:57:48 GMT 2012 Rank 65 Aligned Residues 213 % Identity 18% Template c2r65A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:cell division protease ftsh homolog; PDBTitle: crystal structure of helicobacter pylori atp dependent protease, ftsh2 adp complex Resolution 3.30 Å

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		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.											.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.
Query Sequence		A	T	R	N	P	H	F	N	R	M	I	E	Q	I	E	K	V	A	.	.	.	.	.	.	.	.	.	.	I	K	S	R	A	P	I	L	L	N	G	P	T	G	A	G	K	S	F	L	A	R	R	I	L	E	L	K	Q	A	R	H	Q	F	S	G	A	F	V	E	V	N	C	A	T	L	R	G	D	T	A	M
Query Conservation																				.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.											.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.											.	.	.	.	.	.	.	.
Template Sequence		M	A	G	N	E	E	A	K	E	E	V	V	E	I	V	D	F	L	K	Y	P	E	R	Y	A	N	L	G	A	K	I	P	K	G	V	L	L	V	G	P	P	G	T	G	K	T	L	L	A	K	A	V	A	G	E	A	.	.	.	.	.	.	H	V	P	F	F	S	M	G	G	S	.	.	.	.	.	.	.	.
Template Known Secondary structure		S		S							T	T									S						T	T	T					S							S	S	S	S	S													.	.	.	.	.	.	T								T	G	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																										.	.	.	.	.	.											.	.	.	.	.	.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.							.	.	230	.	.	.	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.						.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure																																								.	.	.	.	.
Query SS confidence																																								.	.	.	.	.
Query Sequence		S	T	L	F	G	H	V	K	G	A	F	T	G	A	R	E	S	R	E	G	L	L	R	S	A	N	G	G	M	L	F	L	D	E	I	G	E	L	.	.	.	.	.	G	A	D	E	Q	A	M	L	L	K	A	I	E	E	K	T	F	Y	P	F	G	S	D	R	Q	V	S	S	D	F	Q	L	I	A	G	T	V
Query Conservation																																								.	.	.	.	.
Alig confidence		.																																						.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Conservation		.																																																													.	.	.	.	.	.	.	.
Template Sequence		.	S	F	I	E	M	F	V	G	L	G	A	S	R	V	R	D	L	F	E	T	A	K	K	Q	A	P	S	I	I	F	I	D	E	I	D	A	I	G	K	N	D	E	R	E	Q	T	L	N	Q	L	L	A	E	M	D	G	F	G	S	E	.	.	.	.	.	.	.	.	N	A	P	V	I	V	L	A	A	T	N
Template Known Secondary structure		.	G	G	G	S			S	S	S		S	T	T											T		S						T	T	G	G	G	T						S	T	T	T	S	S	S					T	T			S		S	.	.	.	.	.	.	.	.	S	S									S
Template Predicted Secondary structure		.																																																													.	.	.	.	.	.	.	.
Template SS confidence
			238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.									.	.	300	.	.	.	.	.	.	.	.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	L	R	Q	L	V	A	E	G	K	F	R	E	D	L	Y	A	R	I	N	L	W	T	F	T	L	P	G	L	R	Q	R	Q	E	D	I	E	P	N	L	D	Y	E	V	E	R	H	A	S	L	T	G	D	S	V	R	F	N	T	E	A	R	R	A	W	L	A	F	A	T	S	P	Q	A	T	W	R	G	N
Query Conservation
Alig confidence				.	.																.	.																					.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.							.
Template Conservation				.	.																.	.																					.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.							.
Template Sequence		R	P	.	.	E	I	L	D	P	A	L	M	R	P	G	R	F	D	R	.	.	Q	V	L	V	D	K	P	D	F	N	G	R	V	E	I	L	K	V	H	I	.	.	.	.	.	.	.	.	K	G	V	K	L	A	N	D	V	N	L	Q	E	V	A	K	L	.	.	.	.	.	.	.	T	A	G	L	A	G	.
Template Known Secondary structure			T	.	.	T	S	S		G	G	G	G	S	T	T	S	S			.	.						S															.	.	.	.	.	.	.	.	T	T	S				S											.	.	.	.	.	.	.			S			S	.
Template Predicted Secondary structure				.	.																.	.																					.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.							.
Template SS confidence
		319	320			.	.	.	.	.	.	.	.	.	330	.	.	.	.	.			.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.									.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.								.	.	.	.	.	.
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.				.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		F	R	E	L	S	A	S	V	T	R	M	A	T	F	A	.	.	.	T	S	G	R	I	T	L	D	V	V	E	D	E	I	N	R	L
Query Conservation																	.	.	.
Alig confidence		.															.	.	.
Template Conservation		.
Template Sequence		.	A	D	L	A	N	I	I	N	E	A	A	L	L	A	G	R	N	N	Q	K	E	V	R	Q	Q	H	L	K	E	A	V	E	R	G
Template Known Secondary structure		.																				S	S									S	S	S	S
Template Predicted Secondary structure		.
Template SS confidence
			379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions