Job Description P38035 Confidence 99.19% Date Thu Jan 5 11:57:48 GMT 2012 Rank 55 Aligned Residues 312 % Identity 12% Template c2qbyA_ PDB info PDB header:replication/dna Chain: A: PDB Molecule:cell division control protein 6 homolog 1; PDBTitle: crystal structure of a heterodimer of cdc6/orc1 initiators2 bound to origin dna (from s. solfataricus) Resolution 3.35 Å

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		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210			.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.
Query SS confidence																																										.	.
Query Sequence		F	A	E	E	R	Q	Q	T	L	D	F	L	K	S	G	I	A	T	R	N	P	H	F	N	R	M	I	E	Q	I	E	K	V	A	I	K	S	R	A	P	.	.	I	L	L	N	G	P	T	G	A	G	K	S	F	L	A	R	R	I	L	E	L	K	Q	A	R	H	Q	F	S	G	A	F	V	E	V	N	C	A
Query Conservation																																										.	.
Alig confidence																																				.						.	.
Template Conservation																																				.
Template Sequence		F	I	N	R	E	Y	L	L	P	D	Y	I	P	D	E	L	P	H	R	E	D	Q	I	R	K	I	A	S	I	L	A	P	L	Y	.	R	E	E	K	P	N	N	I	F	I	Y	G	L	T	G	T	G	K	T	A	V	V	K	F	V	L	S	K	L	H	K	K	F	L	G	K	F	K	H	V	Y	I	N	T	R
Template Known Secondary structure		B	S		G	G	G	G	S	S	S				S			T	T											S	S	G	G	G	G	.	G	T												T	T	S	S																T		S	S
Template Predicted Secondary structure																																				.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.										.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.
Query Sequence		T	L	R	G	D	T	A	M	S	T	L	F	G	H	V	K	G	A	F	T	G	A	R	E	S	R	E	G	.	.	.	.	.	.	.	.	.	L	L	R	S	A	N	G	G	M	L	F	L	D	E	I	G	E	L	G	A	D	E	Q	A	M	L	L	K	A	I	E	E	K	T	F	Y	P	F	G	S	D	R	Q
Query Conservation																														.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.
Template Sequence		Q	I	D	T	P	Y	R	V	L	A	D	L	L	E	S	L	D	V	K	V	P	F	T	G	L	S	I	A	E	L	Y	R	R	L	V	K	A	V	R	D	Y	G	S	Q	V	V	I	V	L	D	E	I	D	A	F	V	K	K	Y	N	D	D	I	L	Y	K	L	S	R	I	N	.	.	.	.	.	.	.	.	S
Template Known Secondary structure					S									T	T	T	T	S					S	S	S																T			S								T							S	S		S	T										.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.									.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	S	D	F	Q	L	I	A	G	T	V	R	D	L	R	Q	L	V	A	E	G	K	F	R	E	D	L	Y	A	R	I	N	L	W	T	F	T	L	P	G	L	R	Q	R	Q	E	D	I	E	P	N	L	D	Y	E	V	E	R	H	A	S	L	T	G	D	S	V	R	F	N	T	E	A	R	R	A	W	L	A
Query Conservation
Alig confidence																	.	.	.	.																												.	.	.	.	.	.
Template Conservation																	.	.	.	.																												.	.	.	.	.	.
Template Sequence		E	V	N	K	I	S	F	I	G	I	T	N	D	V	K	.	.	.	.	F	V	D	L	L	D	P	R	V	K	S	S	L	S	E	E	E	I	I	F	P	P	Y	N	A	E	E	.	.	.	.	.	.	L	E	D	I	L	T	K	R	A	Q	M	A	F	K	P	G	V	L	P	D	N	V	I	K	L	C	A	A
Template Known Secondary structure		S											S		G	G	.	.	.	.	G	G	G	G		T	T					T	T	T	T													.	.	.	.	.	.													B		S	S		S
Template Predicted Secondary structure																	.	.	.	.																												.	.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.					.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210							.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.				.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.
Query SS confidence																													.	.	.
Query Sequence		F	A	T	S	P	Q	A	T	W	R	G	N	F	R	E	L	S	A	S	V	T	R	M	A	T	F	A	.	.	.	T	S	G	R	I	T	L	D	V	V	E	D	E	I	N	R	L	R	Y	N	W	Q	E	S	R	P	S	A	L	T	A	L	L	G	A	E	A	E	N	I	D	L	F	D	R	M	Q	L	E	H
Query Conservation																													.	.	.
Alig confidence				.	.	.	.																						.	.	.
Template Conservation				.	.	.	.
Template Sequence		L	A	.	.	.	.	A	R	E	H	G	D	A	R	R	A	L	D	L	L	R	V	S	G	E	I	A	E	R	M	K	D	T	K	V	K	E	E	Y	V	Y	M	A	K	E	E	I	E	R	D	R	V	R	D	I	I	L	T	L	P	F	H	S	K	L	V	L	M	A	V	V	S	I	S	V	S	T	T	G	A
Template Known Secondary structure				.	.	.	.			T	T																				T	T		S	S																								T	S
Template Predicted Secondary structure				.	.	.	.
Template SS confidence
		241	.					.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		477	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	A	I	C	R	Q	A	K	S	L	S	A	A	G	R	Q	L	F	D	V	S	R	Q	G	K	A	S	V	N	D	A	D	R	L	R	K	Y	L	A	R	F
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	Y	E	T	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	C	K	K	L	G	V	E	A	V	T	Q	R	R	V	S	D	I	I	N	E	L
Template Known Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.							T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		322	.	.	.	.	.														.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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