Job Description P38035 Confidence 99.24% Date Thu Jan 5 11:57:48 GMT 2012 Rank 50 Aligned Residues 136 % Identity 21% Template c2kjqA_ PDB info PDB header:replication Chain: A: PDB Molecule:dnaa-related protein; PDBTitle: solution structure of protein nmb1076 from neisseria meningitidis.2 northeast structural genomics consortium target mr101b. Resolution UNK

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		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	L	K	S	G	I	A	T	R	N	P	H	F	N	R	M	I	E	Q	I	E	K	V	A	I	K	S	R	A	P	I	L	L	N	G	P	T	G	A	G	K	S	F	L	A	R	R	I	L	E	L	K	Q	A	R	H	Q	F	S	G	A	F	V	E	V	N	C	A	T	L	R	G	D	T	A	M	S	T	L
Query Conservation
Alig confidence															.	.	.	.	.																																					.	.	.																	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.																																					.	.	.																	.	.	.	.	.	.	.
Template Sequence		Y	P	S	F	D	K	F	L	G	T	E	N	A	.	.	.	.	.	E	L	V	Y	V	L	R	H	K	H	G	Q	F	I	Y	V	W	G	E	E	G	A	G	K	S	H	L	L	Q	A	W	V	A	Q	A	L	.	.	.	E	A	G	K	N	A	A	Y	I	D	A	A	S	M	P	L	.	.	.	.	.	.	.
Template Known Secondary structure										S			T		.	.	.	.	.												S						S	S	S	T	T	T	T													.	.	.	T	T	T								T	T	T	S			.	.	.	.	.	.	.
Template Predicted Secondary structure															.	.	.	.	.																																					.	.	.																	.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.						.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.				.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	H	V	K	G	A	F	T	G	A	R	E	S	R	E	G	L	L	R	S	A	N	G	G	M	L	F	L	D	E	I	G	E	L	G	A	D	E	Q	A	M	L	L	K	A	I	E	E	K	T	F	Y	P	F	G	S	D	R	Q	V	S	S	D	F	Q	L	I	A	G	T	V	R	D	L	R	Q	L	V	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	A	A	F	E	A	E	Y	L	A	V	D	Q	V	E	K	L	G	N	E	E	Q	A	L	L	F	S	I	F	N	R	F	R	.	.	.	.	.	.	.	.	.	.	N	S	G	K	G	F	L	L	L	G	S	E	Y	T	P	Q	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	G	G		S						S	T	T				S															.	.	.	.	.	.	.	.	.	.			T									S	S		T	T	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.																	.	.	.
Template SS confidence
																			78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.											.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		340	.	.	.	.	.	.	.	.	.	350	.	.		.	.	.	.	.	.	.	360
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		E	G	K	F	R	E	D	L	Y	A	R	I	N	.	L	W	T	F	T	L	P	G
Query Conservation															.
Alig confidence															.
Template Conservation
Template Sequence		Q	L	V	I	R	E	D	L	R	T	R	M	A	Y	C	L	V	Y	E	V	K	P
Template Known Secondary structure		T	S	S									G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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