Job Description P38035 Confidence 94.90% Date Thu Jan 5 11:57:48 GMT 2012 Rank 179 Aligned Residues 134 % Identity 14% Template c2gnoA_ PDB info PDB header:replication Chain: A: PDB Molecule:dna polymerase iii, gamma subunit-related protein; PDBTitle: crystal structure of a dna polymerase iii, gamma subunit-related2 protein (tm0771) from thermotoga maritima msb8 at 2.00 a resolution Resolution 2.00 Å

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		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.			.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		N	R	M	I	E	Q	I	E	K	V	A	I	K	S	R	A	P	I	L	L	N	G	P	T	G	A	G	K	S	F	L	A	R	R	I	L	E	L	K	Q	A	R	H	Q	F	S	G	A	F	V	E	V	N	.	.	C	A	T	L	R	G	D	T	A	M	S	T	L	F	G	H	V	K	G	A	F	T	G	A	R
Query Conservation																																																							.	.
Alig confidence													.		.																																								.	.
Template Conservation													.		.
Template Sequence		L	E	T	L	K	R	I	I	E	K	S	.	E	.	G	I	S	I	L	I	N	G	E	D	L	S	Y	P	R	E	V	S	L	E	L	P	E	Y	V	E	K	F	P	P	K	A	S	D	V	L	E	I	D	P	E	G	E	N	I	G	I	D	D	I	R	T	I	K	D	F	L	N	Y	S	P	E	L	Y	T	R
Template Known Secondary structure											T		.	S	.	S								S	S	S	S															T	S				T	T	T							S	S	S		B													T	S			S	S	S	S	S
Template Predicted Secondary structure													.		.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.		.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	R	E	G	L	L	R	S	A	N	G	G	M	L	F	L	D	E	I	G	E	L	G	A	D	E	Q	A	M	L	L	K	A	I	E	E	K	T	F	Y	P	F	G	S	D	R	Q	V	S	S	D	F	Q	L	I	A	G	T	V	R	D	L	R	Q	L	V	A	E	G	K	F	R	E	D	L	Y	A	R	I
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Template Sequence		K	.	.	.	.	.	.	.	.	.	.	.	.	Y	V	I	V	H	D	C	E	R	X	T	Q	Q	A	A	N	A	F	L	K	A	L	E	E	.	.	.	.	.	.	.	.	.	.	.	P	P	E	Y	A	V	I	V	L	N	T	R	R	.	.	.	.	.	.	.	W	H	Y	L	L	P	T	I	K	S	R	V
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.					T	T	G	G	G	B								T						S	.	.	.	.	.	.	.	.	.	.	.			T	T								S		.	.	.	.	.	.	.	G	G	G	S						T	T	S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Template SS confidence
		91													.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.												.	.	.	.	120	.	.	.	.	.	.	.	.								.	130	.	.	.	.	.	.	.	.	.	140
		352	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	W	T	F	T	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	R	V	V	V	N	V	P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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