Job Description P38035 Confidence 87.80% Date Thu Jan 5 11:57:48 GMT 2012 Rank 369 Aligned Residues 92 % Identity 22% Template c2f55C_ PDB info PDB header:hydrolase/dna Chain: C: PDB Molecule:polyprotein; PDBTitle: two hepatitis c virus ns3 helicase domains complexed with2 the same strand of dna Resolution 3.30 Å

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		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.			.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure																																																.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	L	L	N	G	P	T	G	A	G	K	S	F	L	A	R	R	I	L	E	L	K	Q	A	R	H	Q	F	S	G	A	F	V	E	V	N	C	A	T	L	R	G	D	T	A	M	.	.	S	T	L	F	G	H	V	K	G	A	F	T	G	A	R	E	S	R	E	G	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.														.	.	.																.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.														.	.	.
Template Sequence		A	H	L	H	A	P	T	G	S	G	K	S	T	.	.	K	V	P	A	A	Y	A	A	Q	G	Y	K	V	.	.	.	L	V	L	N	P	S	V	A	A	T	L	G	F	G	A	Y	M	S	K	A	H	G	I	D	P	N	I	R	T	G	V	R	T	I	T	T	G	G	S	I	T	Y	S	T	Y	G	K	F	L
Template Known Secondary structure								S	S	S	S	T	T	T	.	.	T	S						T	T	S				.	.	.					S		S														S	S								S	S								S
Template Predicted Secondary structure															.	.														.	.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.	.	.	220	.	.	.	.	.				.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
					277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	L	L	R	S	A	N	G	G	M	L	F	L	D	E	I	G	E	L	G	A	D	E	Q	A	M	L	L	K	A	I	E
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		A	D	G	G	C	S	G	G	A	Y	D	I	I	I	C	D	E	C	H	S	T	D	S	T	T	I	L	G	I	G	T	V	L	D
Template Known Secondary structure			T	T	S	S	S	T	T			S					T	T	T	T			S											T	T
Template Predicted Secondary structure
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions