Job Description P38035 Confidence 99.39% Date Thu Jan 5 11:57:48 GMT 2012 Rank 40 Aligned Residues 219 % Identity 21% Template c2dhrC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:ftsh; PDBTitle: whole cytosolic region of atp-dependent metalloprotease2 ftsh (g399l) Resolution 3.90 Å

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		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.											.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.
Query Sequence		A	T	R	N	P	H	F	N	R	M	I	E	Q	I	E	K	V	.	.	.	.	.	.	.	.	.	.	A	I	K	S	R	A	P	I	L	L	N	G	P	T	G	A	G	K	S	F	L	A	R	R	I	L	E	L	K	Q	A	R	H	Q	F	S	G	A	F	V	E	V	N	C	A	T	L	R	G	D	T	A	M
Query Conservation																			.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.										.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.										.	.	.	.	.	.	.	.	.
Template Sequence		V	A	G	A	E	E	A	K	E	E	L	K	E	I	V	E	F	L	K	N	P	S	R	F	H	E	M	G	A	R	I	P	K	G	V	L	L	V	G	P	P	G	V	G	K	T	H	L	A	R	A	V	A	G	E	A	.	.	.	.	.	.	R	V	P	F	I	T	A	S	G	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S		S																		G	G	G	T	T	T	T	S					S							S	T	T	S	S												T	.	.	.	.	.	.	T								G	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																										.	.	.	.	.	.										.	.	.	.	.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.							.	.	.	.	.	.	220	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.															.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	T	L	F	G	H	V	K	G	A	F	T	G	A	R	E	S	R	E	G	L	L	R	S	A	N	G	G	M	L	F	L	D	E	I	G	E	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	E	Q	A	M	L	L	K	A	I	E	E	K	T	F	Y	P	F	G	S	D	R	Q	V	S	S
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.	.	.
Template Sequence		S	D	F	V	E	M	F	V	G	V	G	A	A	R	V	R	D	L	F	E	T	A	K	R	H	A	P	C	I	V	F	I	D	E	I	D	A	V	G	R	K	R	G	S	G	V	G	G	G	N	D	E	R	E	Q	T	L	N	Q	L	L	V	E	M	D	G	F	E	.	.	.	.	.	.	.	.	.	K	D	T
Template Known Secondary structure		G	G	G	T	S	S		T	T											T	T	S	T	T	S	S	S								G	G	G	T				S	S	S	S	T	T	T	S	S														G	G	G			.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290										.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	Q	L	I	A	G	T	V	R	D	L	R	Q	L	V	A	E	G	K	F	R	E	D	L	Y	A	R	I	N	L	W	T	F	T	L	P	G	L	R	Q	R	Q	E	D	I	E	P	N	L	D	Y	E	V	E	R	H	A	S	L	T	G	D	S	V	R	F	N	T	E	A	R	R	A	W	L	A	F	A	T
Query Conservation
Alig confidence													.	.																.	.															.	.	.	.	.	.	.	.																								.	.	.	.	.
Template Conservation													.	.																.	.															.	.	.	.	.	.	.	.																								.	.	.	.	.
Template Sequence		A	I	V	V	M	A	A	T	N	R	P	.	.	D	I	L	D	P	A	L	L	R	P	G	R	F	D	R	.	.	Q	I	A	I	D	A	P	D	V	K	G	R	E	Q	.	.	.	.	.	.	.	.	I	L	R	I	H	A	R	G	K	P	L	A	E	D	V	D	L	A	L	L	A	K	R	.	.	.	.	.
Template Known Secondary structure										S		G	.	.	G	G	S		T	T	T	S	S	T	T	S	S			.	.															.	.	.	.	.	.	.	.					T	T	S	S	S					S	S	T	T					T	T	.	.	.	.	.
Template Predicted Secondary structure													.	.																.	.															.	.	.	.	.	.	.	.																								.	.	.	.	.
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.			.	.	.	.	.	310	.	.	.	.	.	.	.	.	.			320	.	.	.	.	.	.	.	.	.	330	.	.	.									.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
		403	.	.	.	.	.	.	410		.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.				.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure										.																	.	.	.
Query SS confidence										.																	.	.	.
Query Sequence		S	P	Q	A	T	W	R	G	.	N	F	R	E	L	S	A	S	V	T	R	M	A	T	F	A	.	.	.	T	S	G	R	I	T	L	D	V	V	E	D	E	I	N	R	L	R	Y	N	W	Q	E	S	R
Query Conservation										.																	.	.	.
Alig confidence		.	.	.	.	.				.																	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	T	P	G	F	V	G	A	D	L	E	N	L	L	N	E	A	A	L	L	A	A	R	E	G	R	R	K	I	T	M	K	D	L	E	E	A	A	D	R	V	M	M	L	P	A	K	K	S
Template Known Secondary structure		.	.	.	.	.	S		S																							S	S			S											T	T		S	S	S	S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions